Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cephalotus_20follicularis_20[genbank_20GCA_5F001972305.1_202017-01- 11] 16,307 sequences; 1,614,517,073 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq2252 77.0 6e-12 >seq2252 Length=180824 Score = 77.0 bits (84), Expect = 6e-12 Identities = 152/222 (68%), Gaps = 11/222 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 ||||||||| ||| ||| | || || | ||| | ||||| | | | | ||| | Sbjct 56042 ATGGTGGATACCTAGGCACCCAGAGATGAGGTAGGGCATAGTAAGTGACAAAATGCTTTG 55983 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 | |||| | ||| | | |||||||| ||||| |||||| || |||| ||| | Sbjct 55982 GAGAGTT-GAAAATAAGCGTTGATCCGGAGATTCCCGAATAGGTCAACC------TTTCG 55930 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAA 186 | | || ||||| ||| |||| |||| || ||| |||||||||||||||| | Sbjct 55929 AACTGT---TGTTGAATCCATGGGTAGGCAAGAGACAACCTAGCGAACTGAAACATCTTA 55873 Query 187 GTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 ||| | |||||||| || ||| | |||||||| |||||| Sbjct 55872 GTAACCAGAGGAAAAGGAAGCAAAAGCGATTCCCATAGTAGT 55831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918250236512