Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq118 78.8 2e-12 >seq118 Length=66824 Score = 78.8 bits (86), Expect = 2e-12 Identities = 104/143 (73%), Gaps = 1/143 (1%) Strand=Plus/Minus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTC-GCGGTAACGCGTGATGGA 251 ||| ||||||| |||||| ||| ||||||||||||| || |||| | |||| Sbjct 54077 GACCCGAAACCGATCGATCTAGCCATGAGCAGGTTGAAGAGAGCTCTAACAGGCCTTGGA 54018 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 |||||||||| | || | ||| | |||||||| | || ||||||||||||||| Sbjct 54017 GGACCGAACCCACGTATGTGGCAAAATACGGGGATGACTTGTGGCTAGGGGTGAAAGGCC 53958 Query 312 AATCAAACTGGGAAATAGCTCGT 334 || ||| | ||| |||||| || Sbjct 53957 AACCAAGATCGGATATAGCTGGT 53935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972770689536