Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20pallidicaule_20[genbank_20GCA_5F001687005.1_202016-07- 18] 3,013 sequences; 337,010,935 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq59 123 3e-26 >seq59 Length=614426 Score = 123 bits (136), Expect = 3e-26 Identities = 139/182 (76%), Gaps = 3/182 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCA 68 ||| |||||||||| ||||||||| | | |||||| |||| |||| | |||||||| || Sbjct 437571 ACTATTACTTTGAAGAAATTAGAGTGCTAAAAGCAAGCCTACGCTCTGTATACATTAGCA 437630 Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128 ||| |||| | |||||| | | || ||||| ||| || | ||| || |||||| Sbjct 437631 TGGGATAACATTATAGGAT-TCCAGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATG 437688 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || || | ||| ||||||||| | ||||| || |||| ||||||||||||||||||| Sbjct 437689 ATTAACAAGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTT 437748 Query 189 AT 190 || Sbjct 437749 AT 437750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511985055520