Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11]
3,486 sequences; 1,333,398,936 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq2526 152 7e-35
seq1358 152 7e-35
seq1334 152 7e-35
seq1174 152 7e-35
seq1159 149 9e-34
seq2024 145 1e-32
seq338 134 2e-29
seq3282 120 4e-25
seq1466 118 1e-24
seq1188 118 1e-24
seq1202 116 5e-24
seq19 109 8e-22
seq1371 107 3e-21
seq2515 100 4e-19
seq2037 100 4e-19
seq1823 96.9 5e-18
seq187 96.9 5e-18
seq3200 78.8 1e-12
seq60 77.0 5e-12
seq2390 73.4 5e-11
>seq2526
Length=327831
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 20108 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 20166
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 20167 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 20224
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 20225 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 20275
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 20276 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 20335
Query 246 GTA 248
|||
Sbjct 20336 GTA 20338
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 210065 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 210123
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 210124 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 210181
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 210182 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 210232
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 210233 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 210292
Query 246 GTA 248
|||
Sbjct 210293 GTA 210295
>seq1358
Length=41681
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 18089 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 18147
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 18148 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 18205
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 18206 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 18256
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 18257 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 18316
Query 246 GTA 248
|||
Sbjct 18317 GTA 18319
>seq1334
Length=80264
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 35899 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 35957
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 35958 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 36015
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 36016 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 36066
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 36067 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 36126
Query 246 GTA 248
|||
Sbjct 36127 GTA 36129
>seq1174
Length=52200
Score = 152 bits (168), Expect = 7e-35
Identities = 181/243 (74%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 30082 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 30140
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 30141 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 30198
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 30199 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 30249
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 30250 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 30309
Query 246 GTA 248
|||
Sbjct 30310 GTA 30312
>seq1159
Length=32853
Score = 149 bits (164), Expect = 9e-34
Identities = 181/243 (74%), Gaps = 13/243 (5%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 505 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 447
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 446 TGTGTTTTTAATAAACAGTCGCTACCC-CTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 390
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 389 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 339
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | |||| |||||| |||||| || ||||||||||||||| |
Sbjct 338 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 279
Query 246 GTA 248
|||
Sbjct 278 GTA 276
>seq2024
Length=19976
Score = 145 bits (160), Expect = 1e-32
Identities = 181/244 (74%), Gaps = 13/244 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 1146 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 1204
Query 66 TGTGTTTTT-AGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACAC 124
||||||||| | |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 1205 TGTGTTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAG 1262
Query 125 GTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCC 184
| || || | ||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1263 AT--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCC 1313
Query 185 TTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
|| || |||| | | | |||| |||||| |||||| || |||||||||||||||
Sbjct 1314 TTCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGG 1373
Query 245 GGTA 248
||||
Sbjct 1374 GGTA 1377
>seq338
Length=2329736
Score = 134 bits (148), Expect = 2e-29
Identities = 178/243 (73%), Gaps = 12/243 (5%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||| | ||||||||||| ||||| | ||||||||| ||||| ||| ||| | ||
Sbjct 226934 CCTTCAAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 226992
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | | | |||| |
Sbjct 226993 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 227050
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||||||||||||||||||||||| |||||||| || |||||
Sbjct 227051 TA-------AG-AGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCTGAGTTCCT 227101
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
| || |||| | | | ||| |||||| |||||| || ||||||||||||||| |
Sbjct 227102 TCGACATGGTTCTCTCAAGAGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 227161
Query 246 GTA 248
|||
Sbjct 227162 GTA 227164
>seq3282
Length=1981832
Score = 120 bits (132), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 13/225 (6%)
Strand=Plus/Plus
Query 25 CGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACCTGTGTTTTTAGTAAACAGT 84
|||||| | ||||||||| ||||| ||| ||| | |||||||||||| ||||||||
Sbjct 1920898 CGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCCTGTGTTTTTAATAAACAGT 1920956
Query 85 CGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACGTCGTTCACCAGCAGTGGCA 144
|||| ||| || | | ||| | | | |||| | | || || | ||
Sbjct 1920957 CGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGAT--------AGGAGAG-CA 1921005
Query 145 CCCCTT-CTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACCCGA 203
|||||| ||||||||||||||||| ||||||||||| |||||| || |||| | | |
Sbjct 1921006 CCCCTTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTTCGACATGGTTCTCTCAA 1921065
Query 204 ACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|||| |||||| |||||| || ||||||||||||||| ||||
Sbjct 1921066 GCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGGGTA 1921110
>seq1466
Length=2737832
Score = 118 bits (130), Expect = 1e-24
Identities = 172/243 (71%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 1574219 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 1574277
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || | ||||| ||
Sbjct 1574278 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCATTTCGACCCCCT------------- 1574324
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1574325 TTGTG----AG--GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 1574378
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||| ||||| | ||||||||| |||| |
Sbjct 1574379 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTTTACCTACCTACCTGTGTCAGTTTCGG 1574438
Query 246 GTA 248
|||
Sbjct 1574439 GTA 1574441
>seq1188
Length=3321382
Score = 118 bits (130), Expect = 1e-24
Identities = 172/243 (71%), Gaps = 24/243 (10%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||||||||||| || |||||| | ||||| | ||| | ||||
Sbjct 2958082 CCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTTCGGAGACC 2958140
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || || ||||| ||
Sbjct 2958141 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTTCGACCTCCT------------- 2958187
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 2958188 TTGTG----AG--GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 2958241
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| |||| ||||||||| |
Sbjct 2958242 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCT----ACCTATGTCGGTTTCGG 2958297
Query 246 GTA 248
|||
Sbjct 2958298 GTA 2958300
>seq1202
Length=5845939
Score = 116 bits (128), Expect = 5e-24
Identities = 173/243 (71%), Gaps = 22/243 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| ||||| ||||||| || |||||| | |||| | ||| | ||||
Sbjct 5248228 CCTTCCGGCACTGGGCAAGCGTCAGCCCC-ATACATGGTTTTAC-GACTTTGTGGAGACC 5248171
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| | || | | || ||||| ||
Sbjct 5248170 TGTGTTTTTGGTAAACAGTCGCCTGGGCCTGT-CACTTCGACCCCCT------------- 5248125
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | |||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 5248124 TTGTG-AC-----GGGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCT 5248071
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | ||| ||||||||||||| | |||||||||||||| |
Sbjct 5248070 TAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCTACCTGTGTCGGTTTTGG 5248011
Query 246 GTA 248
|||
Sbjct 5248010 GTA 5248008
>seq19
Length=1042096
Score = 109 bits (120), Expect = 8e-22
Identities = 172/244 (70%), Gaps = 22/244 (9%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| ||| |||||||||||| || |||||| | ||||| | ||| || |||
Sbjct 16605 CCTTCCGGCACTAGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACG 16547
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| |||||||||||| || || || ||||| ||
Sbjct 16546 TGTGTTTTTGGTAAACAGTCGCCCGGGCCTTGTCACTTCGACCCCCT------------- 16500
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || | ||||| ||||||||||||||||||||| |||||||||| |||||
Sbjct 16499 TTGTG----AG--GGGGCACACCTTCTCCCGAAGTTACGGGGATATTTTGCCGAGTTCCT 16446
Query 186 TAACCACAGTTCACCCGAACGCCTTAG-TATTCTCTACCTGACCACCTGTGTCGGTTTAC 244
|| | |||| | || | |||||| |||||||||||| | ||||||||| ||||
Sbjct 16445 TAGAGAGAGTTGTCTCGCGC-CCTTAGGTATTCTCTACCTACCTACCTGTGTCAGTTTCG 16387
Query 245 GGTA 248
||||
Sbjct 16386 GGTA 16383
>seq1371
Length=8752182
Score = 107 bits (118), Expect = 3e-21
Identities = 134/181 (74%), Gaps = 12/181 (7%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | |
Sbjct 8490073 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACC-ACTTAGCAGAGTTC 8490015
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
|||||||||| |||||||||||| ||| || | | ||| | || |||| |
Sbjct 8490014 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGC--CGCTTTCCTAATCAAAAGA 8489957
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || || |||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 8489956 T--------AGGAG-AGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 8489906
Query 186 T 186
|
Sbjct 8489905 T 8489905
>seq2515
Length=3870133
Score = 100 bits (110), Expect = 4e-19
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||||| ||||||| | |||| |
Sbjct 22189 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 22248
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| ||||||||||||| | || |||||||||| ||||
Sbjct 22249 CGCGCCCCTAGGTATTCTCTACCTACCTACTAGTGTCGGTTTCGGGTA 22296
>seq2037
Length=1587205
Score = 100 bits (110), Expect = 4e-19
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200
|||||||||||||||||||||||||||| |||||||| | ||||||| | |||| |
Sbjct 1580338 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCAAGTTCCTTAGAGAGAGTTGTCT 1580397
Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACGGTA 248
|| | ||| |||||||||||||| | || |||||||||| ||||
Sbjct 1580398 CGCGCCCCTAAGTATTCTCTACCTACCTACTAGTGTCGGTTTCGGGTA 1580445
>seq1823
Length=5187694
Score = 96.9 bits (106), Expect = 5e-18
Identities = 166/239 (69%), Gaps = 24/239 (10%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||| ||||||| |||| || |||||| | |||| | ||| | ||||
Sbjct 2554569 CCTTCCAGCACTAGGCAGGCATCAGCCCCCATACATGGTCTTAA-GACTTTTTAGAGACC 2554627
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCT--CTATTCTCTGCGACCACCACCAGCTCAACA 123
|||||||| ||||||||||| ||| || || || ||||| || |
Sbjct 2554628 TGTGTTTTCTGTAAACAGTCG--TCCGGGCCTGGTCACTTCGACCCCCTCT--------- 2554676
Query 124 CGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTC 183
|| || | || ||||||||||| ||||||||||||| |||||||||| |||
Sbjct 2554677 ----GTG----AG--GGGGTACCCCTTCTCCTGAAGTTACGGGGCTATTTTGCCGAGTTC 2554726
Query 184 CTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242
||| | ||| | || | ||| |||||||||||||| | ||||||||||||||
Sbjct 2554727 CTTGGAGAGTGTTATCTCGCGCCCCTAGGTATTCTCTACCTGCCTACCTGTGTCGGTTT 2554785
>seq187
Length=8652782
Score = 96.9 bits (106), Expect = 5e-18
Identities = 166/243 (68%), Gaps = 20/243 (8%)
Strand=Plus/Plus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
|||||| || ||| ||||||||| || |||||| | ||||| | ||| || ||||
Sbjct 7182975 CCTTCCGGCATTGGGTAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGGAGACC 7183033
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125
||||||||| ||||||||||| | || || || ||||| |
Sbjct 7183034 TGTGTTTTTGGTAAACAGTCGTCTGGGCCTGGTCACTTCGACCCCTT------------- 7183080
Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185
| || | || |||||||||||||||||||||||| ||| |||||| ||| |||||
Sbjct 7183081 TTGT------GAAGAGGCACCCCTTCTCCCGAAGTTACGAGGCTATTTTGTCGAGTTCCT 7183134
Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245
|| | |||| | || | || ||||||||||||| | || ||||| || || |
Sbjct 7183135 TAGAGAGAGTTGTCTCGCGCCCCAAGGTATTCTCTACCTTCCTACATGTGTTGGCTTCGG 7183194
Query 246 GTA 248
|||
Sbjct 7183195 GTA 7183197
>seq3200
Length=1577474
Score = 78.8 bits (86), Expect = 1e-12
Identities = 72/90 (80%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65
||||||| ||||||||||| ||||| | ||||||||| || || ||| ||| | ||
Sbjct 1501737 CCTTCCAGCACCGGGCAGGTGTCAGACTTTATACATCGTGTTTCC-ACTTAGCAGAGTCC 1501679
Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCT 95
|||||||||| ||||||||| || ||| ||
Sbjct 1501678 TGTGTTTTTAATAAACAGTCACTACCCCCT 1501649
>seq60
Length=7217281
Score = 77.0 bits (84), Expect = 5e-12
Identities = 70/87 (80%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| |||||| ||| ||||| ||||||| || |||||| | ||||| | ||| ||
Sbjct 3390315 CTTAACCTTCCGGCACTGGGCAAGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 3390373
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGC 87
||||||||||||| ||||||||||||
Sbjct 3390374 AGACCTGTGTTTTTGGTAAACAGTCGC 3390400
>seq2390
Length=8026821
Score = 73.4 bits (80), Expect = 5e-11
Identities = 43/45 (96%), Gaps = 0/45 (0%)
Strand=Plus/Plus
Query 142 GCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTT 186
|||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 935395 GCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCTT 935439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694376549678
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |