Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11] 3,486 sequences; 1,333,398,936 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq1094 93.3 4e-17 seq60 93.3 4e-17 seq2526 91.5 1e-16 seq1371 91.5 1e-16 seq1358 91.5 1e-16 seq1334 91.5 1e-16 seq1174 91.5 1e-16 seq1466 87.8 2e-15 seq1188 87.8 2e-15 seq1159 87.8 2e-15 seq3200 86.0 6e-15 seq338 86.0 6e-15 seq2024 84.2 2e-14 seq320 78.8 9e-13 seq187 78.8 9e-13 seq19 78.8 9e-13 >seq1094 Length=315333 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| ||||||||||| |||||||||| ||| ||||| ||| Sbjct 109915 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGA 109856 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || | |||| ||| |||||||||||| |||||||||||| || Sbjct 109855 AACACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 109810 >seq60 Length=7217281 Score = 93.3 bits (102), Expect = 4e-17 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 3390421 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 3390362 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||| ||||| ||||||||||||||| Sbjct 3390361 AAGACCATGTATGGGGGCTGACGCTTGCCCAGTGCCGGAAGGTTAA 3390316 >seq2526 Length=327831 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 20201 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 20142 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 20141 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 20107 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 210158 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 210099 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 210098 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 210064 >seq1371 Length=8752182 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 8489980 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGAACTCTGCTAAGTGGTAACACGAT 8490039 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 8490040 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 8490074 >seq1358 Length=41681 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 18182 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 18123 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 18122 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 18088 >seq1334 Length=80264 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 35992 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 35933 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 35932 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 35898 >seq1174 Length=52200 Score = 91.5 bits (100), Expect = 1e-16 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 30175 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 30116 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 30115 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 30081 >seq1466 Length=2737832 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||||| |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 1574320 GGTCGAAATGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 1574261 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 1574260 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 1574215 >seq1188 Length=3321382 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| ||||||||||| |||||||||| ||| | ||| || Sbjct 2958183 GGTCGAAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGAAAAGTCGT 2958124 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 2958123 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 2958078 >seq1159 Length=32853 Score = 87.8 bits (96), Expect = 2e-15 Identities = 77/95 (81%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 413 ATACCAGGG-GTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 471 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 472 GTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 506 >seq3200 Length=1577474 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | | ||||||||||||||||||||| ||||||| || |||| || Sbjct 1501644 ATACCAGGGGGTAGTGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGAAACACGAT 1501703 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 ||||| || |||| |||||||||||| ||||||| Sbjct 1501704 GTATAAAGTCTGACACCTGCCCGGTGCTGGAAGGT 1501738 >seq338 Length=2329736 Score = 86.0 bits (94), Expect = 6e-15 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGAC 114 |||||||| | ||||||||||||||||||||||| ||||||| || | || || Sbjct 227027 ATACCAGGGGGTAGCGACTGTTTATTAAAAACACAGGACTCTGCTAAGTGGTAACACGAT 226968 Query 115 GTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| |||||| Sbjct 226967 GTATAGAGTCTGACACCTGCCCGGTGCTTGAAGGT 226933 >seq2024 Length=19976 Score = 84.2 bits (92), Expect = 2e-14 Identities = 77/96 (80%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 55 ATACCAGGCCGCTGCGACTGTTTATTAAAAA-CACAGCACTCTGCAAACACGAAAGTGGA 113 |||||||| | |||||||||||||||||| ||||| ||||||| || | || || Sbjct 1240 ATACCAGGGGGTAGCGACTGTTTATTAAAAAACACAGGACTCTGCTAAGTGGTAACACGA 1181 Query 114 CGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 |||||| || |||| |||||||||||| ||||||| Sbjct 1180 TGTATAGAGTCTGACACCTGCCCGGTGCTGGAAGGT 1145 >seq320 Length=5058940 Score = 78.8 bits (86), Expect = 9e-13 Identities = 80/103 (78%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| |||||||||| ||||||||| ||| ||||| || Sbjct 523561 GGTCGAAGTGACCAGGCCCGGACGACTGTTTACCAAAAACACAAGTCTCCGCAAAGTCGT 523502 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGT 149 ||| | |||| ||| |||||||||||| |||||||||||| Sbjct 523501 AAGACCATGTATGGGGC-TGACGCCTGCCCAGTGCCGGAAGGT 523460 >seq187 Length=8652782 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| |||||||| |||||||||| |||||||||| ||| ||||| || Sbjct 7183076 GGTCGAAGTGACCAGGCCCAGACGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 7183017 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||| ||| ||||||||||| || Sbjct 7183016 AAGACCATGTATGGGGGCTGACGCCTACCCAATGCCGGAAGGTCAA 7182971 >seq19 Length=1042096 Score = 78.8 bits (86), Expect = 9e-13 Identities = 81/106 (76%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 |||||||| || ||||| ||||||||||| ||||||||| ||| ||||| || Sbjct 16504 GGTCGAAGTGACAAGGCCCGGGCGACTGTTTACCAAAAACACACGTCTCCGCAAAGTCGT 16563 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| ||||||||||| |||||||||||| || Sbjct 16564 AAGACCATGTATGGGGGCTGACGCCTGCCTAGTGCCGGAAGGTCAA 16609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476783898166