Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11]
3,486 sequences; 1,333,398,936 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
seq89 221 3e-55
seq1940 219 9e-55
seq320 212 1e-52
seq2526 205 2e-50
seq1174 205 2e-50
seq2314 201 2e-49
seq1188 199 8e-49
seq1094 199 8e-49
seq19 199 8e-49
seq1466 196 1e-47
seq1580 185 2e-44
seq2098 172 1e-40
seq281 168 1e-39
seq661 159 7e-37
seq2752 152 1e-34
seq3210 145 2e-32
seq2851 131 4e-28
seq1964 111 3e-22
seq701 91.5 3e-16
seq2785 84.2 5e-14
>seq89
Length=2496132
Score = 221 bits (244), Expect = 3e-55
Identities = 239/310 (77%), Gaps = 20/310 (6%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 781138 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 781196
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 781197 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 781256
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | |
Sbjct 781257 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 781316
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 781317 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 781362
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 781363 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 781420
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 781421 GTCCGCCACT 781430
>seq1940
Length=2879745
Score = 219 bits (242), Expect = 9e-55
Identities = 236/308 (77%), Gaps = 16/308 (5%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 469498 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 469440
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 469439 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 469380
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| ||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | |
Sbjct 469379 ACTAATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 469320
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 469319 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 469274
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGT 327
| |||||||| ||| | |||| || ||||| ||| || || ||||||||||||
Sbjct 469273 CAGCCGTTTCCAGCTGTTGTTCCCCTCTCAAGGGCAGGTTCTTACGCGTTACTCACCCGT 469214
Query 328 CCGCCGCT 335
||||| ||
Sbjct 469213 CCGCCACT 469206
>seq320
Length=5058940
Score = 212 bits (234), Expect = 1e-52
Identities = 237/310 (76%), Gaps = 20/310 (6%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||||||||||||||| || ||||||||||||||||||
Sbjct 528950 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 529008
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| | |||||||||| |||||||| ||||||||||||| |||||| |
Sbjct 529009 CCGTAGGAGTCTGGTCTGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTTGGACCAGCT 529068
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | |
Sbjct 529069 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCC 529128
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 529129 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 529174
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 529175 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 529232
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 529233 GTCCGCCACT 529242
>seq2526
Length=327831
Score = 205 bits (226), Expect = 2e-50
Identities = 168/202 (83%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76
||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| ||||||
Sbjct 39591 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 39648
Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|||||||||| ||||| |||||| || |||||||||||| |||||||| ||||||||||
Sbjct 39649 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 39708
Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196
||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| |
Sbjct 39709 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 39768
Query 197 ACCTAGGCTCATCTGATAGCGC 218
|| ||||||||| | |||||
Sbjct 39769 ACGCAGGCTCATCAAACAGCGC 39790
>seq1174
Length=52200
Score = 205 bits (226), Expect = 2e-50
Identities = 168/202 (83%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76
||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| ||||||
Sbjct 49565 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 49622
Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|||||||||| ||||| |||||| || |||||||||||| |||||||| ||||||||||
Sbjct 49623 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 49682
Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196
||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| |
Sbjct 49683 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 49742
Query 197 ACCTAGGCTCATCTGATAGCGC 218
|| ||||||||| | |||||
Sbjct 49743 ACGCAGGCTCATCAAACAGCGC 49764
>seq2314
Length=2717392
Score = 201 bits (222), Expect = 2e-49
Identities = 237/312 (76%), Gaps = 24/312 (8%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||| ||||| || | || ||||||||||||| || ||||||||||||||||||
Sbjct 2312035 CACGCGACATTG-CTCCGTTAGACTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 2312093
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||| ||||||| |||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 2312094 CCGTAGAAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 2312153
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAG--GCT 205
|| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || ||
Sbjct 2312154 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 2312213
Query 206 CATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATT 265
| || | ||| || || ||| | ||||| || | || | ||||||
Sbjct 2312214 CCTCGG---GCG-AATTCC------TCCTTTTGCTTCTC----AG--CCTACGAGGTATT 2312257
Query 266 AGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCAC 323
||| |||||||| | ||| | ||| || ||| || || ||| || || ||||||||
Sbjct 2312258 AGCAGCCGTTTCCAACTGTTGTTCCC--CTCCCAAGGGTAGGTTCTTACGCGTTACTCAC 2312315
Query 324 CCGTCCGCCGCT 335
| ||||||| ||
Sbjct 2312316 CTGTCCGCCACT 2312327
>seq1188
Length=3321382
Score = 199 bits (220), Expect = 8e-49
Identities = 147/170 (86%), Gaps = 1/170 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||||| |||||||||||| || |||||||||| ||||| |
Sbjct 2963384 CACGCGGCATTG-CTCCATCAGGATTTCGCCCATTGCGGAAAATTCCCCACTACTGCCCC 2963442
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| ||| |||| ||||||||||| || |||||| |
Sbjct 2963443 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTTTCGGACCAGCT 2963502
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|| |||| |||||||||| ||| ||| ||||||||||||||||||| |||
Sbjct 2963503 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 2963552
>seq1094
Length=315333
Score = 199 bits (220), Expect = 8e-49
Identities = 233/309 (75%), Gaps = 18/309 (6%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||| ||||| || |||||||||||||||||| || ||||||||||| ||||||
Sbjct 118073 CACGCGACATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGGTGCCTC 118131
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||| ||||||| |||||||| ||| |||||||| |||||||||||||| |||||| |
Sbjct 118132 CCGTAGAAGTCTGGGCCGTGTCTTAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 118191
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208
|| |||| || ||||||| ||| ||| ||| ||||||||||||||| ||| | || | |
Sbjct 118192 ACTGATCATCACCTTGGTAAGCTATTGCCTTACCAACTAGCTAATCAGACGTGAGCCCCT 118251
Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268
| ||| || || ||| | ||||| || | || | |||||||||
Sbjct 118252 CCTCGGGCG-AATTCC------TCCTTTTGCTTCTC----AG--CCTACGGGGTATTAGC 118298
Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326
|||||||| ||| | ||| || ||| ||||| ||| || || |||||||||||
Sbjct 118299 AGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCCG 118356
Query 327 TCCGCCGCT 335
|||||| ||
Sbjct 118357 TCCGCCACT 118365
>seq19
Length=1042096
Score = 199 bits (220), Expect = 8e-49
Identities = 234/310 (75%), Gaps = 20/310 (6%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || ||| | ||| ||||||| || ||||||||||||||||||
Sbjct 11138 CACGCGGCATTG-CTCCGTCAAGATTTTGCCCATTACGGAAAATTCCCCACTGCTGCCTC 11080
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||||| |||||||||||| |||||||| |||||||| ||||| |||||| |
Sbjct 11079 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATTCTCTCGGACCAGCT 11020
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | |
Sbjct 11019 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 10960
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 10959 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 10914
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| |||||||| ||| | ||| || ||| ||||| ||| || || ||||||||||
Sbjct 10913 CAGCCGTTTCCAGTTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 10856
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 10855 GTCCGCCACT 10846
>seq1466
Length=2737832
Score = 196 bits (216), Expect = 1e-47
Identities = 231/308 (75%), Gaps = 16/308 (5%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||||| ||||| || ||||| |||||||||||| || ||||||||||||||||||
Sbjct 1579699 CACGCAACATTG-CTCCGTCAGGATTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 1579757
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||| |
Sbjct 1579758 CCGTAAGAGTCTGGGTCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACCAGCT 1579817
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCA 207
|| |||| |||||||||| ||| ||| ||||||||||||||||||| ||| | || | |
Sbjct 1579818 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCGAGCCCCT 1579877
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 1579878 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 1579923
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCAGGCAGATTCCTAGGCATTACTCACCCGT 327
| |||||||| ||| | |||| | ||||| ||| || || ||||||||||||
Sbjct 1579924 CAGCCGTTTCCAGCTGTTGTTCCCCTCCCGAGGGCAGGTTCTTACGCGTTACTCACCCGT 1579983
Query 328 CCGCCGCT 335
||||| ||
Sbjct 1579984 CCGCCACT 1579991
>seq1580
Length=5301032
Score = 185 bits (204), Expect = 2e-44
Identities = 231/310 (75%), Gaps = 20/310 (6%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
|||||||||||| || |||| ||||||||||||| || ||||||| || |||||||
Sbjct 1060850 CACGCGGCATTG-CTCCGTCAGACTTTCGCCCATTGCGGAAAATTCCCCCCTCCTGCCTC 1060908
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||| | |||||||| ||| | |||||| |||||||||||||| |||||| |
Sbjct 1060909 CCGTAGGAGTCTAGGCCGTGTCTTAGTCCAAGTGTGGCTGATCATCCTCTCGGACCAGCT 1060968
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA-CCTAGGCTCA 207
|| |||| | |||||||| ||| ||| ||||||||||||||||||| || | || | |
Sbjct 1060969 ACTGATCATTGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGATGCGAGCCCCT 1061028
Query 208 TCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267
|| || ||| || ||| |||| | | | | || | ||||||||
Sbjct 1061029 CCT-----CG---GGC-----GGATTCCTCCTTTTGCTTCTCAG-CCTACGGGGTATTAG 1061074
Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325
| ||||||||| ||| | ||| || ||| ||||| ||| || || ||||| ||||
Sbjct 1061075 CATCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTTACCC 1061132
Query 326 GTCCGCCGCT 335
||||||| ||
Sbjct 1061133 GTCCGCCACT 1061142
>seq2098
Length=8369107
Score = 172 bits (190), Expect = 1e-40
Identities = 139/167 (83%), Gaps = 1/167 (1%)
Strand=Plus/Plus
Query 32 GCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCG 91
||||||||| || ||||||||||||||||||| || |||||||| ||||||||||||
Sbjct 1042682 GCGGCATTG-CTCCATCAGGCTTTCGCCCATTGCGGAAAATTCCCCATTGCTGCCTCCCG 1042740
Query 92 TAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACG 151
||||||||||| || ||||| ||| | |||||| ||||| || |||| |||| |||
Sbjct 1042741 TAGGAGTCTGGGCCATGTCTTAGTCCTAGTGTGGCTGATTATTTTCTCGAACCAACTACT 1042800
Query 152 GATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
|||| ||||||| || ||| |||||| |||||||||||||||| |||
Sbjct 1042801 GATCATCGCCTTAGTAAGCTATTACCACACCAACTAGCTAATCAGAC 1042847
>seq281
Length=8267699
Score = 168 bits (186), Expect = 1e-39
Identities = 160/202 (79%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76
||||||| ||| |||||| |||| |||||| | ||||| |||||||||||| ||||||
Sbjct 7331195 CCTTCTT-CACTCACGCGATATTG-CTGGATTGGACTTTCACCCATTGTCCAAGATTCCC 7331252
Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|||||||||| ||||| ||||| | |||||||| ||| | |||||| ||||||||||
Sbjct 7331253 CACTGCTGCCCCCCGTGGGAGTTCGAGCCGTGTCTTAGTCCTAGTGTGGCTGATCATCCG 7331312
Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196
||||||| || | ||| | | |||||| ||| |||||| |||||||| ||||| |
Sbjct 7331313 AAAAGACCAGCTAAGTATCATTGGCTTGGTTAGCTTTTACCTTACCAACTACCTAATACC 7331372
Query 197 ACCTAGGCTCATCTGATAGCGC 218
|| ||||||||| | |||||
Sbjct 7331373 ACGCAGGCTCATCAAACAGCGC 7331394
>seq661
Length=2431326
Score = 159 bits (176), Expect = 7e-37
Identities = 120/141 (85%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106
||||||||| ||||||| || |||||||||||||||||| |||||||||| | ||
Sbjct 670339 TCAGGCTTTTTCCCATTGCAAAAAATTCCCCACTGCTGCCTCTTGTAGGAGTCTAGGTCG 670398
Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166
||||||||| |||||||| ||||||||||||||||| ||| || |||| ||||||||||
Sbjct 670399 TGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCAGAACAGCTATTGATCATCGCCTTGGT 670458
Query 167 GAGCCATTACCTCACCAACTA 187
||| ||| ||||||||||||
Sbjct 670459 AAGCTATTGCCTCACCAACTA 670479
>seq2752
Length=1580380
Score = 152 bits (168), Expect = 1e-34
Identities = 115/133 (86%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76
||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| ||||||
Sbjct 80133 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 80076
Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|||||||||| ||||| |||||| || |||||||||||| |||||||| ||||||||||
Sbjct 80075 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 80016
Query 137 CTCAGACCAGTTA 149
||||||| ||
Sbjct 80015 AAAAGACCAGCTA 80003
>seq3210
Length=6607953
Score = 145 bits (160), Expect = 2e-32
Identities = 100/112 (89%), Gaps = 1/112 (1%)
Strand=Plus/Plus
Query 25 CACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTG 84
||| |||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 3602519 CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTG 3602577
Query 85 CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136
|| ||||| |||||| || |||||||||||| |||||||| |||||||||||
Sbjct 3602578 CCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCT 3602629
>seq2851
Length=3570316
Score = 131 bits (144), Expect = 4e-28
Identities = 119/149 (80%), Gaps = 1/149 (1%)
Strand=Plus/Plus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||| || ||||| || |||||||||| || |||| || |||||||||| || ||||
Sbjct 1279996 CACACGACATTG-CTCCGTCAGGCTTTCCCCTATTGCGGAAAATTCCCCACTACTACCTC 1280054
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||||||| | |||| ||||||| |||||||| ||||||||||| | |||||| |
Sbjct 1280055 CCGTAGGAGTCTAGGCCGTATCTCAGTCCCAGTGTGGCTGATCATCCTATTGGACCAGCT 1280114
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACC 177
|| ||||| | |||||| ||| ||| ||
Sbjct 1280115 ACTTATCGTTGGCTTGGTAAGCTATTGCC 1280143
>seq1964
Length=2807053
Score = 111 bits (122), Expect = 3e-22
Identities = 116/154 (75%), Gaps = 9/154 (6%)
Strand=Plus/Minus
Query 56 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 115
|||| ||||||||| |||||||||||||||| ||||| |||||| | ||||||||| ||
Sbjct 1840452 CGCCTATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCAGGCCGTGTCTCGGT 1840393
Query 116 TCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTA 175
|||||||| ||||||||| || || || | |||||| | || |||
Sbjct 1840392 CCCAGTGTGGTTGATCATCCAAAATGATCAAATATG---------CTTGGTCAACCTTTA 1840342
Query 176 CCTCACCAACTAGCTAATCCGACCTAGGCTCATC 209
||| |||||||| ||||| | || |||||||||
Sbjct 1840341 CCTGACCAACTACCTAATACTACGCAGGCTCATC 1840308
>seq701
Length=2649514
Score = 91.5 bits (100), Expect = 3e-16
Identities = 120/170 (71%), Gaps = 31/170 (18%)
Strand=Plus/Minus
Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88
||||||||||| || |||||||||||||||||| || |||||| |||||||||||
Sbjct 1857294 CACGCGGCATTT-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCTACTGCTGCCTC 1857236
Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148
|||||||| || || |||||||||||| |||
Sbjct 1857235 CCGTAGGA---------------CA---------TGGTTGATCATCCTCTTGGAC----- 1857205
Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198
| |||| |||||||||| ||| ||| ||||||||||||||||||| |||
Sbjct 1857204 -CTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 1857156
>seq2785
Length=3276392
Score = 84.2 bits (92), Expect = 5e-14
Identities = 51/54 (94%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 75 CCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTG 128
|||||||||||||||||||||||||||| |||||||||||| |||||||| |||
Sbjct 2453859 CCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTG 2453912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1071962630080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |