Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chenopodium_20quinoa_20[genbank_20GCA_5F001683475.1_202016-07-11]
3,486 sequences; 1,333,398,936 total letters
Query= AAMG01001821.1
Length=161
Score E
Sequences producing significant alignments: (Bits) Value
seq1940 131 1e-28
seq3337 127 2e-27
seq2526 125 6e-27
seq2024 125 6e-27
seq1188 125 6e-27
seq1174 125 6e-27
seq281 125 6e-27
seq2314 122 7e-26
seq1094 122 7e-26
seq19 122 7e-26
seq1371 120 3e-25
seq320 118 9e-25
seq1466 113 4e-23
seq2851 104 2e-20
seq142 100 2e-19
>seq1940
Length=2879745
Score = 131 bits (144), Expect = 1e-28
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 470392 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 470333
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | |||||||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 470332 GATCGCGGCCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 470273
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 470272 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 470233
>seq3337
Length=2964736
Score = 127 bits (140), Expect = 2e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 2400535 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 2400476
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | |||||||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 2400475 GATCGCGGCCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 2400416
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||| ||||||| ||||||||||||| || ||||
Sbjct 2400415 GATGACTTGATGTCATCCTCACCTTCCTCCGGCTTATCAC 2400376
>seq2526
Length=327831
Score = 125 bits (138), Expect = 6e-27
Identities = 125/161 (78%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| |
Sbjct 38358 TCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 38416
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| |||| |||||||||||||
Sbjct 38417 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 38476
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| |||||||||||||||||||||||||||| || | ||||
Sbjct 38477 TGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 38517
>seq2024
Length=19976
Score = 125 bits (138), Expect = 6e-27
Identities = 125/161 (78%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| |
Sbjct 19395 TCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 19453
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| |||| |||||||||||||
Sbjct 19454 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 19513
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| |||||||||||||||||||||||||||| || | ||||
Sbjct 19514 TGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 19554
>seq1188
Length=3321382
Score = 125 bits (138), Expect = 6e-27
Identities = 127/162 (78%), Gaps = 4/162 (2%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGAT-ACAC-TTTCTGGGATTAGCTCCCCCTCGC 59
|||||||||| || ||||||| || ||| || ||| |||| ||||||| |||||||
Sbjct 2962490 CGAGTTGCAGCCTGCAATCCGAAC--CGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGC 2962547
Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119
||| | || ||||| ||| |||||||| ||||||| |||| |||||||| |
Sbjct 2962548 GGGATCGCAGCCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGC 2962607
Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|||| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2962608 ATGATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2962649
>seq1174
Length=52200
Score = 125 bits (138), Expect = 6e-27
Identities = 125/161 (78%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| |
Sbjct 48332 TCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 48390
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| |||| |||||||||||||
Sbjct 48391 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 48450
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| |||||||||||||||||||||||||||| || | ||||
Sbjct 48451 TGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 48491
>seq281
Length=8267699
Score = 125 bits (138), Expect = 6e-27
Identities = 125/161 (78%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||||| ||| | | ||||| || ||| ||||| ||| |
Sbjct 5927258 TCGAGTTGCAGAGAACAATCCGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 5927200
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| |||| |||||||||||||
Sbjct 5927199 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 5927140
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| |||||||||||||||||||||||||||| || | ||||
Sbjct 5927139 TGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 5927099
Score = 107 bits (118), Expect = 2e-21
Identities = 121/161 (75%), Gaps = 1/161 (1%)
Strand=Plus/Plus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| |||||| | ||| | | ||||| || ||| ||||| ||| |
Sbjct 7329963 TCGAGTTGCAGAGAACAATCTGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 7330021
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| | || ||||||||| |||
Sbjct 7330022 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGTCCAGCCCATAAGGTCCA 7330081
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||||||||||||||| || | ||||
Sbjct 7330082 TGCAGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 7330122
>seq2314
Length=2717392
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
||||||| || || ||||||| ||| | || || |||| ||||||| |||||||||
Sbjct 2311141 CGAGTTGTAGCCTGCAATCCGAACTGAGGACCAGTTATTGGGGTTAGCTCACCCTCGCGG 2311200
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| ||||||| |||
Sbjct 2311201 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGTATAAGGGGCAT 2311260
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 2311261 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 2311300
>seq1094
Length=315333
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || |||| || ||| | ||| |||| ||||||| |||||||||
Sbjct 117179 CGAGTTGCAGCCTGCAATTCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 117238
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 117239 GATCGCGACCCTTTGTCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 117298
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 117299 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 117338
>seq19
Length=1042096
Score = 122 bits (134), Expect = 7e-26
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| |||||||||
Sbjct 12032 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCGG 11973
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | ||| |||| ||| |||||||| ||||||| |||| |||||||| |||
Sbjct 11972 GATCGCGACCCTTTGTCCCAGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 11913
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||| | || ||||
Sbjct 11912 GATGACTTGACGTCATCCTCACCTTCCTCCAGCTTATCAC 11873
>seq1371
Length=8752182
Score = 120 bits (132), Expect = 3e-25
Identities = 124/161 (77%), Gaps = 1/161 (1%)
Strand=Plus/Minus
Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||||| ||||| || ||| | | ||||| || ||| ||||| ||| |
Sbjct 4394109 TCGAGTTGCAGAGAACAATACGAACTGAGGCAATCTTTCCGG-ATTCGCTCCGCCTTACA 4394051
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
| | || ||| |||| | |||||||| ||||||| |||| |||||||||||||
Sbjct 4394050 GCCTTGCTTCCCATTGTAATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCA 4393991
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| |||||||||||||||||||||||||||| || | ||||
Sbjct 4393990 TGTGGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 4393950
>seq320
Length=5058940
Score = 118 bits (130), Expect = 9e-25
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| |||| ||||||| ||||||| |
Sbjct 528056 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTGGGGTTAGCTCACCCTCGCAG 528115
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| |||||||| | | |||||||| ||||||| |||| |||||||| |||
Sbjct 528116 GAGCGCGGCCCTTTATCCCGGCCATTGTAGCACGTGTGTCGCCCAGGGCATAAGGGGCAT 528175
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 528176 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 528215
>seq1466
Length=2737832
Score = 113 bits (124), Expect = 4e-23
Identities = 121/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61
|||||||||| || ||||||| ||| | ||| | || ||||||| |||| ||||
Sbjct 1578805 CGAGTTGCAGCCTGCAATCCGAACTGAGGACGGGTTTTTAGGGTTAGCTCACCCTTGCGG 1578864
Query 62 GTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCAT 121
| | |||||||| ||| || ||||| ||||||| ||| |||||||| |||
Sbjct 1578865 GATCGCGGCCCTTTGTCCCGGCCGTTGTAGCACGTGTGTCGCCAAGGGCATAAGGGGCAT 1578924
Query 122 GAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|| ||||||||||||||| ||||||||||||| || ||||
Sbjct 1578925 GATGACTTGACGTCATCCTCACCTTCCTCCGGCTTATCAC 1578964
>seq2851
Length=3570316
Score = 104 bits (114), Expect = 2e-20
Identities = 116/152 (76%), Gaps = 6/152 (4%)
Strand=Plus/Plus
Query 2 CGAGTTGCAGACTACAATCCGGACT-ACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60
|||||||||| || ||||||| ||| | || | ||| |||| ||||||| ||||||||
Sbjct 1279167 CGAGTTGCAGCCTGCAATCCGAACTCAGGACGAATTTTTTGGG-TTAGCTCACCCTCGCG 1279225
Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120
|| | || ||||| ||| ||| |||| | || |||| | |||||||| ||
Sbjct 1279226 GGATCGCAGCCCTTTGTCCCGGCCACTGTAGCATGTC----GCCCAAGGCATAAGGGGCA 1279281
Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152
||| ||||||||||||||| ||||||||||||
Sbjct 1279282 TGATGACTTGACGTCATCCTCACCTTCCTCCG 1279313
>seq142
Length=9138691
Score = 100 bits (110), Expect = 2e-19
Identities = 81/98 (83%), Gaps = 0/98 (0%)
Strand=Plus/Plus
Query 64 TGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGA 123
|||| ||| |||| | |||||||| ||||||| |||| |||||||||||||||
Sbjct 3478054 TGGCTTCCCATTGTAACTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGC 3478113
Query 124 GGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161
|||||||||||||||||||||||||||| || | ||||
Sbjct 3478114 GGACTTGACGTCATCCCCACCTTCCTCCAGTATATCAC 3478151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415985951420
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