Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chenopodium_20suecicum_20[genbank_20GCA_5F001687025.1_202016-07-18] 11,198 sequences; 536,949,264 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq2383 102 1e-19 >seq2383 Length=69992 Score = 102 bits (112), Expect = 1e-19 Identities = 192/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Plus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| |||| |||| | | | |||||| || || ||| |||||||| | Sbjct 59241 GCTTTCGTCTCTCATAGTCATTGTCGGCCCAGCAGAGTGCTTTTGCCGTTGGTGTTCTTT 59300 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 || |||||||||||||||||| ||| |||||| |||| || | |||| || Sbjct 59301 TCGATCTCTACGCATTTCACCGCTCCACCGAAAATTCCCTCTGCCCCTACCATACTCCAG 59360 Query 126 AAAAACAGTTTCAAATGCAGGCTAT---GGGTTGAGCCCATAGTTTTCACATCTGACTTG 182 |||||| | || |||| |||||||||| | ||| || | ||||| Sbjct 59361 CTTGGTAGTTTCCACCGC---CTATCTAGGGTTGAGCCGTAGGATTTGACGGCGGACTTA 59417 Query 183 CCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTA 242 || ||||| | |||||| |||||| | | |||||||||||||| ||| || Sbjct 59418 AAAGGCCAGCTACAGACGCTTTACGCCCAATCATTTCGGATAACGCTTGCATCCTCTGTC 59477 Query 243 TTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCC 283 |||| || ||||||||||| ||||||||| ||| ||||| Sbjct 59478 TTACTGCTGCTGCTGGCACAGAGTTAGCCGATGCTCATTCC 59518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828710091258