Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq309 152 7e-35 seq6 152 7e-35 seq7127 145 1e-32 seq498 145 1e-32 seq1 145 1e-32 seq166 125 1e-26 seq702 98.7 1e-18 >seq309 Length=193478 Score = 152 bits (168), Expect = 7e-35 Identities = 181/243 (74%), Gaps = 12/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 136182 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 136124 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 136123 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 136066 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 136065 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 136015 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 136014 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 135955 Query 246 GTA 248 ||| Sbjct 135954 GTA 135952 >seq6 Length=59463898 Score = 152 bits (168), Expect = 7e-35 Identities = 181/243 (74%), Gaps = 12/243 (5%) Strand=Plus/Plus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||||||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 21477924 CCTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAGAGTCC 21477982 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 21477983 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 21478040 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 21478041 T--------AGGAGAG-CACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTCCT 21478091 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| |||||| || ||||||||||||||| | Sbjct 21478092 TCGACATGGTTCTCTCAAGCGCCCTAGTATACTCTACTTGTTCACCTGTGTCGGTTTGGG 21478151 Query 246 GTA 248 ||| Sbjct 21478152 GTA 21478154 >seq7127 Length=125319 Score = 145 bits (160), Expect = 1e-32 Identities = 181/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 102843 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 102785 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| || || |||||||| || Sbjct 102784 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCTCCT-------- 102733 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||||||||| |||||||||| Sbjct 102732 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAG 102684 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 102683 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 102624 Query 241 TTACGGTA 248 || |||| Sbjct 102623 TTCGGGTA 102616 >seq498 Length=436133 Score = 145 bits (160), Expect = 1e-32 Identities = 181/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 371358 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 371416 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| || || |||||||| || Sbjct 371417 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCTCCT-------- 371468 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||||||||| |||||||||| Sbjct 371469 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAG 371517 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 371518 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 371577 Query 241 TTACGGTA 248 || |||| Sbjct 371578 TTCGGGTA 371585 Score = 82.4 bits (90), Expect = 1e-13 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | |||| || ||| || Sbjct 372753 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTA-CGACTTTGCGG 372811 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGC 87 ||||||||||||| |||||||||||| Sbjct 372812 AGACCTGTGTTTTTGGTAAACAGTCGC 372838 >seq1 Length=48359943 Score = 145 bits (160), Expect = 1e-32 Identities = 181/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 45008765 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 45008707 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| || || |||||||| || Sbjct 45008706 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCTCCT-------- 45008655 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||||||||| |||||||||| Sbjct 45008654 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAG 45008606 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 45008605 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 45008546 Query 241 TTACGGTA 248 || |||| Sbjct 45008545 TTCGGGTA 45008538 Score = 145 bits (160), Expect = 1e-32 Identities = 181/248 (73%), Gaps = 20/248 (8%) Strand=Plus/Plus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| |||||| ||| ||||||||||||| || |||||| | ||||| | ||| || Sbjct 45250113 CTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC-GACTTTGCGG 45250171 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 ||||||||||||| |||||||||||| || || |||||||| || Sbjct 45250172 AGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCTCCT-------- 45250223 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 | || || || ||||||||||||||||||||||||||| |||||||||| Sbjct 45250224 -----TTGTG----AGGAG--GCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAG 45250272 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 ||||||| | |||| | || | ||| ||||||||||||| |||||||||||||| Sbjct 45250273 TTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGT 45250332 Query 241 TTACGGTA 248 || |||| Sbjct 45250333 TTCGGGTA 45250340 >seq166 Length=220966 Score = 125 bits (138), Expect = 1e-26 Identities = 176/243 (72%), Gaps = 13/243 (5%) Strand=Plus/Minus Query 6 CCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACGGACC 65 ||||||| ||| ||||||| ||||| | ||||||||| ||||| ||| ||| | || Sbjct 189559 CCTTCCAGCACTGGGCAGGTGTCAGACTCTATACATCGTGTTACCA-CTTAGCAAAGTCC 189501 Query 66 TGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAACACG 125 |||||||||| |||||||||||| ||| || | | ||| | | | |||| | Sbjct 189500 TGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCCTAA--TCAAAAGA 189443 Query 126 TCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCT 185 | || || | ||||||||||| ||||||||||||| ||||||||||| || || Sbjct 189442 T--------AGGAGAG-CACCCCTTCTCTCGAAGTTACGGGGTCATTTTGCCGAGTT-CT 189393 Query 186 TAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTTACG 245 | || |||| | | | |||| |||||| ||| || || ||||||||| ||||| | Sbjct 189392 TGGACATGGTTCTCTCAAGCGCCCTAGTATACTCAACTTGTTCACCTGTGTTGGTTTGGG 189333 Query 246 GTA 248 ||| Sbjct 189332 GTA 189330 >seq702 Length=688796 Score = 98.7 bits (108), Expect = 1e-18 Identities = 83/102 (81%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 141 GGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAATTCCTTAACCACAGTTCACC 200 |||||||||||||||||||||| ||||| || ||| ||| ||||||| | |||| | Sbjct 403566 GGCACCCCTTCTCCCGAAGTTATGGGGCTATGTTGTCGAGTTCCTTAGGGAAAGTTGTCT 403507 Query 201 CGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTTT 242 || | ||| ||||||||||||| |||||||||||||||| Sbjct 403506 CGCGCCCCTAGGTATTCTCTACCTACCCACCTGTGTCGGTTT 403465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694352056671