Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq7127 241 3e-61 seq1 241 3e-61 seq498 226 6e-57 seq3120 206 6e-51 seq2880 203 7e-50 seq381 203 7e-50 seq5 125 2e-26 seq747 104 5e-20 >seq7127 Length=125319 Score = 241 bits (266), Expect = 3e-61 Identities = 259/336 (77%), Gaps = 19/336 (6%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || ||||||| | | |||||||||||| || ||||||||||||||| Sbjct 97600 TTGACGACCCGTAGGCCTTCTTCCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 97543 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct 97542 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGT 97483 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| |||||||||| Sbjct 97482 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCAC 97423 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||||||||||| ||| || | || | || | || ||| | || Sbjct 97422 CAACTAGCTAATCAGACGCGAGCCCCTC--------CTTGGGCGGA--TTCCTCCTTTTG 97373 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA-- 299 || || || | |||| ||||||||| |||||||| ||| ||||| || ||| Sbjct 97372 CT-CCTCAG--CCTATGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCC--CTCCCAAG 97318 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 97317 GGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 97282 >seq1 Length=48359943 Score = 241 bits (266), Expect = 3e-61 Identities = 259/336 (77%), Gaps = 19/336 (6%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || ||||||| | | |||||||||||| || ||||||||||||||| Sbjct 45003522 TTGACGACCCGTAGGCCTTCTTCCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 45003465 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct 45003464 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGT 45003405 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| |||||||||| Sbjct 45003404 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCAC 45003345 Query 182 CAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTT 241 ||||||||||||| ||| || | || | || | || ||| | || Sbjct 45003344 CAACTAGCTAATCAGACGCGAGCCCCTC--------CTTGGGCGGA--TTCCTCCTTTTG 45003295 Query 242 CTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA-- 299 || || || | |||| ||||||||| |||||||| ||| ||||| || ||| Sbjct 45003294 CT-CCTCAG--CCTATGGGGTATTAGCAGCCGTTTCCAGCTGTTGTCCCC--CTCCCAAG 45003240 Query 300 GGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||| ||| || || ||||||||||||||||| || Sbjct 45003239 GGCAGGTTCTTACGCGTTACTCACCCGTCCGCCACT 45003204 Score = 214 bits (236), Expect = 4e-53 Identities = 157/180 (87%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 14 AGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATT 73 || ||||||| | | |||||||||||| || ||||||||||||||||||| || ||| Sbjct 32081087 AGGCCTTCTTCCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGTGGAAAATT 32081144 Query 74 CCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCAT 133 ||||||||||| ||||||||||||||||| || ||||||||| |||||||| |||||||| Sbjct 32081145 CCCCACTGCTGTCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGTGTGGCTGATCAT 32081204 Query 134 CCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 |||||| ||||| ||| |||| |||||||||| ||| |||||||||||||||||||||| Sbjct 32081205 CCTCTCGGACCAACTACTGATCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCTAAT 32081264 >seq498 Length=436133 Score = 226 bits (250), Expect = 6e-57 Identities = 170/197 (86%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || ||||||| | | |||||||||||| || ||||||||||||||| Sbjct 362131 TTGACGACCCGTAGGCCTTCTTCCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCA 362074 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||||||||||||||||||||||||| || ||||||||| ||||| Sbjct 362073 TTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCTTGTCTCAGTCCCAGT 362014 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| ||| |||| |||||||||| ||| |||||||||| Sbjct 362013 GTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTACCTCAC 361954 Query 182 CAACTAGCTAATCCGAC 198 ||||||||||||| ||| Sbjct 361953 CAACTAGCTAATCAGAC 361937 >seq3120 Length=8392 Score = 206 bits (228), Expect = 6e-51 Identities = 180/220 (82%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 1952 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 2009 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 2010 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 2069 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 2070 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 2129 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 2130 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 2169 >seq2880 Length=31836 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 3045 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 2988 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 2987 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 2928 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 2927 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 2868 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 ||||||| ||||| | || ||||||||| | ||||| Sbjct 2867 GCCCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 2828 >seq381 Length=138491 Score = 203 bits (224), Expect = 7e-50 Identities = 179/220 (81%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 87692 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 87635 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 87634 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 87575 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 87574 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 87515 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 ||||||| ||||| | || ||||||||| | ||||| Sbjct 87514 GCCCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 87475 >seq5 Length=48169137 Score = 125 bits (138), Expect = 2e-26 Identities = 96/114 (84%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 85 CCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACC 144 |||||||||||| | |||||| |||| ||| || ||||| |||||||||||||| |||| Sbjct 35939060 CCTCCCGTAGGAATTTGGACCTTGTCCTAGTCCCGGTGTGGCTGATCATCCTCTCGGACC 35939001 Query 145 AGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || || || | |||||||||| ||| |||||||||||||||||| |||| ||| Sbjct 35939000 AGCTATTGACCATCGCCTTGGTAAGCTATTACCTCACCAACTAGCAAATCAGAC 35938947 Score = 89.7 bits (98), Expect = 1e-15 Identities = 72/86 (84%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 109 TCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGA 168 |||| || |||||||| |||||| |||||| || || ||| |||| |||||||||| | Sbjct 34337806 TCTC-GTCCCAGTGTGGTTGATCACCCTCTCGAACTAGCTACTGATCATCGCCTTGGTAA 34337748 Query 169 GCCATTACCTCACCAACTAGCTAATC 194 || ||||||||| ||||||||||||| Sbjct 34337747 GCTATTACCTCATCAACTAGCTAATC 34337722 >seq747 Length=270902 Score = 104 bits (114), Expect = 5e-20 Identities = 93/113 (82%), Gaps = 4/113 (4%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||| | Sbjct 251135 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCAC 251192 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCT 111 ||||||||||| |||||||||||||||| ||| | ||||| || |||||||| Sbjct 251193 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCATGGGAGTTCGGGCCGTGTCT 251245 Score = 87.8 bits (96), Expect = 4e-15 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 108 GTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTG 167 |||||||||||| |||| |||||||||| ||||||| || | ||| | | |||||| Sbjct 262300 GTCTCAGTTCCACTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTC 262359 Query 168 AGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 |||| |||||||| |||||| ||||| | || || ||||| Sbjct 262360 AGCCTTTACCTCAACAACTACCTAATACTACACAGTCTCAT 262400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071923598560