Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq7127 233 5e-59 seq1 233 5e-59 seq3 226 7e-57 seq7 224 2e-56 seq31 140 8e-31 seq6 107 5e-21 >seq7127 Length=125319 Score = 233 bits (258), Expect = 5e-59 Identities = 313/417 (75%), Gaps = 20/417 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 101758 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 101702 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 101701 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 101646 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 101645 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 101588 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAA 243 ||||||| || |||||| | | |||| | ||| ||| |||| |||| ||| | | Sbjct 101587 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCC--CCA 101531 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | ||||||||||||| || |||||||||| | ||||||||||||||| | || Sbjct 101530 GCTC--CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GG 101474 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||| Sbjct 101473 GGTTCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAG 101414 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 101413 CCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 101357 >seq1 Length=48359943 Score = 233 bits (258), Expect = 5e-59 Identities = 313/417 (75%), Gaps = 20/417 (5%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 45007680 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 45007624 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 45007623 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 45007568 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 45007567 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 45007510 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAA 243 ||||||| || |||||| | | |||| | ||| ||| |||| |||| ||| | | Sbjct 45007509 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCC--CCA 45007453 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | ||||||||||||| || |||||||||| | ||||||||||||||| | || Sbjct 45007452 GCTC--CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GG 45007396 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||| Sbjct 45007395 GGTTCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAG 45007336 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||| | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 45007335 CCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 45007279 Score = 91.5 bits (100), Expect = 4e-16 Identities = 124/161 (77%), Gaps = 9/161 (6%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 45251198 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 45251254 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 45251255 ACCTAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 45251310 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC 169 ||| | | |||||| ||||||||| |||||||||| |||| Sbjct 45251311 GACAATA-GCCCTATGAAGACTCGC-TTTCGCTACGGCTCC 45251349 >seq3 Length=39989001 Score = 226 bits (250), Expect = 7e-57 Identities = 310/415 (75%), Gaps = 20/415 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 5659337 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 5659393 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 5659394 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 5659449 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 5659450 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 5659507 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA---CCCAACAA 243 ||||||| || |||||| | | |||| | ||| ||| |||| |||| ||| | | Sbjct 5659508 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCC--CCA 5659564 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | ||||||||||||| || |||||||||| | ||||||||||| ||| | || Sbjct 5659565 GCTC--CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTTCCCGATG-GG 5659621 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 |||||||||| ||||||||||||||||||| |||||||||||||| ||| ||||||||| Sbjct 5659622 GGTTCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAG 5659681 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 ||||| | | |||||| | ||||| || || | ||||| || | ||||| Sbjct 5659682 CCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACT 5659736 >seq7 Length=48961560 Score = 224 bits (248), Expect = 2e-56 Identities = 308/414 (74%), Gaps = 15/414 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 26701119 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 26701175 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 26701176 ACCTAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 26701231 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | | |||||| |||||||||||| ||||||| |||| | ||| |||| | Sbjct 26701232 GACAATA-GCCCTATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGTTTCCCTTAACCAA 26701289 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | | | Sbjct 26701290 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGCCCTAGCT 26701348 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| || |||||||||| | |||||||||||||| | ||||| Sbjct 26701349 C--CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACTCCCGGATG-GGGGT 26701405 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 26701406 TCTTTTCACCTTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 26701465 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | |||| || || | ||||| || | ||||||| Sbjct 26701466 TGCAAGGTGGTCCTTGCTGATTCCCACGGGATTCCACGTGCCCCATGCTACTCG 26701519 >seq31 Length=190769 Score = 140 bits (154), Expect = 8e-31 Identities = 207/290 (71%), Gaps = 24/290 (8%) Strand=Plus/Plus Query 137 GCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTG 194 |||||| |||||||||||| ||||||| ||| | ||| |||| | ||||||| Sbjct 122096 GCCCTATGAAGACTCGCTTT-CGCTACGGCTCTAGTGGTTTCCCTTAACCAA-GCCACTG 122153 Query 195 AAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCA----CCCAACAAAGTGGGC 250 || |||||| | | |||| | ||| ||| ||| |||| |||||| | Sbjct 122154 CCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGTGGTCAGAGCCCCAACTC------C 122207 Query 251 TCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTT 310 |||||||||||| || |||||||||| | ||||||||||| | ||||||| Sbjct 122208 TCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCACT---------GAGGTTCTT 122258 Query 311 TTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGA 370 ||| ||||||||||||||||||| || |||||||||| || ||||| ||||||||| | Sbjct 122259 TTCACCTTTCCCTCACGGTACTACTTTGCTATCGGTCACCCAATAGTA-TTAGCCTTGCA 122317 Query 371 GGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 122318 AGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 122367 >seq6 Length=59463898 Score = 107 bits (118), Expect = 5e-21 Identities = 103/130 (79%), Gaps = 3/130 (2%) Strand=Plus/Plus Query 255 ACTGCTTGTACGCATACGGTTTCAGG--ATCTATTTCACTCCCCTCTCCGGGGTTCTTTT 312 |||| |||| ||||| | | ||||| ||||||| ||||||| | |||||||||| Sbjct 21479399 ACTGATTGTTCGCATCGGATCTCAGGTTATCTATTGCACTCCC-TAAATAGGGTTCTTTT 21479457 Query 313 CGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGG 372 | |||||||||||||||||| || | |||||||||| | || | || |||| ||| |||| Sbjct 21479458 CACCTTTCCCTCACGGTACTTGTACGCTATCGGTCATTGAGGAATACTTAGGCTTAGAGG 21479517 Query 373 ATGGTCCCCC 382 ||||||||| Sbjct 21479518 GTGGTCCCCC 21479527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241511511168