Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16]
7,127 sequences; 530,893,862 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq7127 149 1e-33
seq1 149 1e-33
seq498 145 1e-32
seq2880 141 2e-31
>seq7127
Length=125319
Score = 149 bits (164), Expect = 1e-33
Identities = 206/286 (72%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| ||||||||||
Sbjct 97915 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 97856
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || ||||||||||||| |||| ||| | |||||| |||| || | | |||| ||
Sbjct 97855 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 97796
Query 126 AAAAACAGTTT-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
||||| || | | | | ||||||||||| | ||| || | ||||
Sbjct 97795 CTTGGTAGTTTTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAA 97737
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || ||
Sbjct 97736 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTT 97677
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 97676 ACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 97631
>seq1
Length=48359943
Score = 149 bits (164), Expect = 1e-33
Identities = 206/286 (72%), Gaps = 2/286 (1%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| ||||||||||
Sbjct 45003837 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 45003778
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || ||||||||||||| |||| ||| | |||||| |||| || | | |||| ||
Sbjct 45003777 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 45003718
Query 126 AAAAACAGTTT-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184
||||| || | | | | ||||||||||| | ||| || | ||||
Sbjct 45003717 CTTGGTAGTTTTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAA 45003659
Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || ||
Sbjct 45003658 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTT 45003599
Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 45003598 ACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 45003553
Score = 131 bits (144), Expect = 3e-28
Identities = 196/276 (71%), Gaps = 2/276 (1%)
Strand=Plus/Plus
Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75
|||| |||||| | | |||||| || |||||| |||||||||| | || || |
Sbjct 32080770 CTCAATGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTTCCAATCTCAA 32080829
Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135
||||||||| |||| ||| | |||||| |||| || | | |||| || ||||
Sbjct 32080830 CGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACTGTACTCTAGCTTGGTAGTT 32080889
Query 136 T-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194
| || | | | | ||||||||||| | ||| || | |||| || ||||
Sbjct 32080890 TTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAAAGCCACCTA 32080948
Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254
|| | |||||| |||||| | |||||||||||||||| || || ||||||||||||
Sbjct 32080949 CAAACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATTCTCTGTCTTACCGCGGCTG 32081008
Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||| ||||||||| ||||||||| ||| ||
Sbjct 32081009 CTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 32081044
>seq498
Length=436133
Score = 145 bits (160), Expect = 1e-32
Identities = 203/285 (71%), Gaps = 0/285 (0%)
Strand=Plus/Minus
Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65
||||||| ||||| |||||| | | |||||| || |||||| ||||||||||
Sbjct 362446 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 362387
Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125
| || ||||||||||||| |||| ||| | |||||| |||| || | | |||| ||
Sbjct 362386 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 362327
Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185
||||| | || | ||||||||||| | ||| || | ||||
Sbjct 362326 CTTGGTAGTTTTCACCACATGTCCAGGGTTGAGCCCTGGGATTTAACGGCGAACTTAAAA 362267
Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245
|| |||||| | |||||| |||||| | |||||||||||||||| ||| || |||
Sbjct 362266 AGCCACCTACAAACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 362207
Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||| |||||||||||| ||||||||| ||||||||| ||| ||
Sbjct 362206 CCGTGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCCCCAGATA 362162
>seq2880
Length=31836
Score = 141 bits (156), Expect = 2e-31
Identities = 207/290 (71%), Gaps = 12/290 (4%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| | ||||||| || |||| | | |||||||| ||| ||
Sbjct 3362 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 3303
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| |||| |||| || |||||||| ||||||||| |||||| | ||||| |||
Sbjct 3302 TCCTTCGTAGATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 3243
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTT----GAGCCCATAGTTTTCACATCT 176
||||| || ||||| | ||| | | ||| | | | || ||||| | |
Sbjct 3242 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTAACTTTCA-ACCC 3184
Query 177 GACTTGCCTTC-CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235
|| ||| |||||||| ||||||||| |||| | | |||| | ||| |||||| |
Sbjct 3183 GA------TTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCC 3130
Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
| ||| |||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 3129 CCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 3080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828742777317
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |