Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq7127 149 1e-33 seq1 149 1e-33 seq498 145 1e-32 seq2880 141 2e-31 >seq7127 Length=125319 Score = 149 bits (164), Expect = 1e-33 Identities = 206/286 (72%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||||| Sbjct 97915 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 97856 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||||||||||| |||| ||| | |||||| |||| || | | |||| || Sbjct 97855 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 97796 Query 126 AAAAACAGTTT-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 ||||| || | | | | ||||||||||| | ||| || | |||| Sbjct 97795 CTTGGTAGTTTTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAA 97737 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || |||||| | |||||| |||||| | |||||||||||||||| ||| || || Sbjct 97736 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTT 97677 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 97676 ACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 97631 >seq1 Length=48359943 Score = 149 bits (164), Expect = 1e-33 Identities = 206/286 (72%), Gaps = 2/286 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||||| Sbjct 45003837 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 45003778 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||||||||||| |||| ||| | |||||| |||| || | | |||| || Sbjct 45003777 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 45003718 Query 126 AAAAACAGTTT-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCC 184 ||||| || | | | | ||||||||||| | ||| || | |||| Sbjct 45003717 CTTGGTAGTTTTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAA 45003659 Query 185 TTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || |||||| | |||||| |||||| | |||||||||||||||| ||| || || Sbjct 45003658 AAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTT 45003599 Query 245 ACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||| ||||||||| ||||||||| ||| || Sbjct 45003598 ACCGCGGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 45003553 Score = 131 bits (144), Expect = 3e-28 Identities = 196/276 (71%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 16 CTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTA 75 |||| |||||| | | |||||| || |||||| |||||||||| | || || | Sbjct 32080770 CTCAATGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTTCCAATCTCAA 32080829 Query 76 CGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTT 135 ||||||||| |||| ||| | |||||| |||| || | | |||| || |||| Sbjct 32080830 CGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACTGTACTCTAGCTTGGTAGTT 32080889 Query 136 T-CAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTA 194 | || | | | | ||||||||||| | ||| || | |||| || |||| Sbjct 32080890 TTCACCACCTGTCCA-GGGTTGAGCCCTGGGATTTGACGGCGAACTTAAAAAGCCACCTA 32080948 Query 195 CACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGCTG 254 || | |||||| |||||| | |||||||||||||||| || || |||||||||||| Sbjct 32080949 CAAACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATTCTCTGTCTTACCGCGGCTG 32081008 Query 255 CTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||| ||||||||| ||||||||| ||| || Sbjct 32081009 CTGGCACAGAGTTAGCCGATGCTTATTCCCCAGATA 32081044 >seq498 Length=436133 Score = 145 bits (160), Expect = 1e-32 Identities = 203/285 (71%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| ||||| |||||| | | |||||| || |||||| |||||||||| Sbjct 362446 GCTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCCTT 362387 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || ||||||||||||| |||| ||| | |||||| |||| || | | |||| || Sbjct 362386 CCGATCTCTACGCATTTCATCGCTCCACCGGAAATTCCCTCTGCCCCTACCGTACTCTAG 362327 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 ||||| | || | ||||||||||| | ||| || | |||| Sbjct 362326 CTTGGTAGTTTTCACCACATGTCCAGGGTTGAGCCCTGGGATTTAACGGCGAACTTAAAA 362267 Query 186 TCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTA 245 || |||||| | |||||| |||||| | |||||||||||||||| ||| || ||| Sbjct 362266 AGCCACCTACAAACGCTTTACGCCCAATCATTCCGGATAACGCTTGCATCCTCTGTCTTA 362207 Query 246 CCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||| |||||||||||| ||||||||| ||||||||| ||| || Sbjct 362206 CCGTGGCTGCTGGCACAGAGTTAGCCGGTGCTTATTCCCCAGATA 362162 >seq2880 Length=31836 Score = 141 bits (156), Expect = 2e-31 Identities = 207/290 (71%), Gaps = 12/290 (4%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| |||||||| | ||||||| || |||| | | |||||||| ||| || Sbjct 3362 CCCATGCTTTCGCACTCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 3303 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| |||| |||| || |||||||| ||||||||| |||||| | ||||| ||| Sbjct 3302 TCCTTCGTAGATCTGCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 3243 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTT----GAGCCCATAGTTTTCACATCT 176 ||||| || ||||| | ||| | | ||| | | | || ||||| | | Sbjct 3242 TCAAGTGAATTGGTTTCGAGAGCATTCCACCAGTTTTTGGCGACTTTAACTTTCA-ACCC 3184 Query 177 GACTTGCCTTC-CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCAC 235 || ||| |||||||| ||||||||| |||| | | |||| | ||| |||||| | Sbjct 3183 GA------TTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCC 3130 Query 236 CTACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285 | ||| |||||||||||||||||||| ||||||||| ||||| |||||| Sbjct 3129 CCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 3080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828742777317