Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cicer_20arietinum_20[refseq_20GCF_5F000331145.1_202013-01-16] 7,127 sequences; 530,893,862 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq7127 273 3e-71 seq498 273 3e-71 seq1 273 3e-71 seq6 196 8e-48 seq166 185 1e-44 seq7 163 4e-38 seq5 154 2e-35 >seq7127 Length=125319 Score = 273 bits (302), Expect = 3e-71 Identities = 225/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 103766 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 103707 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 103706 TTTACCGTTGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 103647 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 103646 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 103587 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||| Sbjct 103586 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACCT 103527 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||| ||||| | || |||||||||||| Sbjct 103526 ACTACAGCTCCAGGTGGCGAAGAGCCGACATCG 103494 >seq498 Length=436133 Score = 273 bits (302), Expect = 3e-71 Identities = 225/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 370435 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 370494 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 370495 TTTACCGTTGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 370554 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 370555 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 370614 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||| Sbjct 370615 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACCT 370674 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||| ||||| | || |||||||||||| Sbjct 370675 ACTACAGCTCCAGGTGGCGAAGAGCCGACATCG 370707 >seq1 Length=48359943 Score = 273 bits (302), Expect = 3e-71 Identities = 225/273 (82%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| |||||| Sbjct 45249190 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCG 45249249 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | |||||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 45249250 TTTACCGTTGGCACAATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 45249309 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| ||||||||||||||| || Sbjct 45249310 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACG 45249369 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||| Sbjct 45249370 ACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACCT 45249429 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||| ||||| | || |||||||||||| Sbjct 45249430 ACTACAGCTCCAGGTGGCGAAGAGCCGACATCG 45249462 >seq6 Length=59463898 Score = 196 bits (216), Expect = 8e-48 Identities = 194/251 (77%), Gaps = 4/251 (2%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 21477043 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 21477102 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 21477103 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 21477162 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 21477163 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 21477222 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACG 264 || ||| ||| |||||||| || |||||||||||||| ||||| |||||||||| || | Sbjct 21477223 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATG 21477282 Query 265 AGCCGACATCG 275 || |||||||| Sbjct 21477283 AGTCGACATCG 21477293 >seq166 Length=220966 Score = 185 bits (204), Expect = 1e-44 Identities = 181/233 (78%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 |||||||| ||| || ||| |||||| ||||| ||| ||||| ||||| | ||| | Sbjct 190422 AACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTACACCATAGGTTGGCCCAAC 190363 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 || ||||||||||| || || ||||||| || | ||| || || ||| ||| Sbjct 190362 CCAGTCCTCTCGTATTAGGGTTGGCTCCTCGCAGTTCTCCCTTTAACACCAACGGTAGAT 190303 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| || |||||||||| ||||||||| |||||| ||| ||| || ||| ||| |||||| Sbjct 190302 AGGAACTGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCACTTGAATCGGCGAA 190243 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 190242 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 190190 >seq7 Length=48961560 Score = 163 bits (180), Expect = 4e-38 Identities = 193/260 (74%), Gaps = 1/260 (0%) Strand=Plus/Minus Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCA 75 ||||||||| |||| |||||| |||| |||| ||| |||| | | | || ||| Sbjct 22352161 CTTAGATGCTTTCAATAGTTATCCGATCCACACTTGGCTACCCATTGTTTACCGTTTGCA 22352102 Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135 | || || | |||||||||| |||| ||||||||||||||||||| | | || |||| Sbjct 22352101 TGATAATTGATACACCAGAGGTGCGTCCGTCCCGGTCCTCTCGTACTAGGAAAAGGTCCT 22352042 Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195 ||||| || ||||| || | ||| |||||||||| | || ||||||||| ||||| Sbjct 22352041 CTCAATGCTCTAACGCCTACACCAAATATGGACCGAACTATTTCACGACGTTCTCAACCC 22351982 Query 196 AGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAG 255 | ||| | | | |||||||| || |||| ||| | ||||| ||||||| |||| ||| Sbjct 22351981 AACTCACATACTGCTTTAATGAGCAAACATTCCAGCGCTTGGAACCTACTACAGCTCCAA 22351922 Query 256 GATGAGACGAGCCGACATCG 275 | | || | |||||||||| Sbjct 22351921 GTGGCGAAGCGCCGACATCG 22351902 >seq5 Length=48169137 Score = 154 bits (170), Expect = 2e-35 Identities = 164/216 (76%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 33600980 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 33601039 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT- 147 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 33601040 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 33601099 Query 148 ---ACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGT 204 || || ||| |||||| ||||||||||||| ||||||||| |||||| ||| ||| Sbjct 33601100 TTAACACCAACGGTAGATAGGAACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGT 33601159 Query 205 GCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 || ||| ||| |||||||| || |||||||||||| Sbjct 33601160 ACCACTTGAATCGGCGAACAACCGAACCCTTGGGAC 33601195 Score = 86.0 bits (94), Expect = 1e-14 Identities = 111/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Plus Query 29 CAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGC 88 |||| || | || | | |||||||| ||| || ||| |||||| ||||| ||| | Sbjct 33599894 CAGCAGTTCTTCCATACCAACTTAGCAGCCCGGCGCTGCTATTGGCATAACAACCGGTAC 33599953 Query 89 ACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCC-- 146 |||| ||||| | ||| ||| |||||||||||||| || ||||||| || | ||| Sbjct 33599954 ACCATAGGTTGGCCCAACCCAGTCCTCTCGTACTAGGGTTGGCTCCTCGCAGTTCTCCCT 33600013 Query 147 --TACGCCCACGACGGATAGGGACCGAACTGTC 177 || || ||| |||||| ||||||||||| Sbjct 33600014 TTAACACCAACGGTAGATAGGAACCGAACTGTC 33600046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780746091372