Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 86.0 1e-14
>seq22748
Length=18834
Score = 86.0 bits (94), Expect = 1e-14
Identities = 209/310 (67%), Gaps = 9/310 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69
|||| |||||||||| | |||| ||| || | ||||| || |||| || || ||
Sbjct 14587 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 14528
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 14527 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 14471
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| | ||| ||||| || ||||||||| ||| | |||| | || ||
Sbjct 14470 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 14415
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 14414 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 14355
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| |||||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 14354 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 14295
Query 310 CCAATCAAAC 319
||| || |||
Sbjct 14294 CCACTCGAAC 14285
Score = 86.0 bits (94), Expect = 1e-14
Identities = 209/310 (67%), Gaps = 9/310 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69
|||| |||||||||| | |||| ||| || | ||||| || |||| || || ||
Sbjct 17052 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 16993
Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129
|||| |||||||| ||| | |||||||| ||| | | | | || || |||||||
Sbjct 16992 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 16936
Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189
|| | ||| ||||| || ||||||||| ||| | |||| | || ||
Sbjct 16935 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 16880
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| |||| | |||||||| ||| || |||| ||||| ||| | | ||
Sbjct 16879 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 16820
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| |||||||| | |||||| | | ||||||| | | || ||||||||||| |
Sbjct 16819 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 16760
Query 310 CCAATCAAAC 319
||| || |||
Sbjct 16759 CCACTCGAAC 16750
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972408467456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |