Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq22748 86.0 1e-14 >seq22748 Length=18834 Score = 86.0 bits (94), Expect = 1e-14 Identities = 209/310 (67%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69 |||| |||||||||| | |||| ||| || | ||||| || |||| || || || Sbjct 14587 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 14528 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 14527 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 14471 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | |||| | || || Sbjct 14470 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 14415 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 14414 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 14355 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 14354 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 14295 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 14294 CCACTCGAAC 14285 Score = 86.0 bits (94), Expect = 1e-14 Identities = 209/310 (67%), Gaps = 9/310 (3%) Strand=Plus/Minus Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGT--GATTC 69 |||| |||||||||| | |||| ||| || | ||||| || |||| || || || Sbjct 17052 GGGGAGTGAAATAGAACATGAAACCGTAAGCTTCCAAGCAGTGGGAGGAGACCAGGACTC 16993 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 |||| |||||||| ||| | |||||||| ||| | | | | || || ||||||| Sbjct 16992 --TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCA-TAGGCAGTGGCTTGGTTAAG 16936 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || | ||| ||||| || ||||||||| ||| | |||| | || || Sbjct 16935 GGAACCCA--CCGG-AGCCGTAGCGAAAGCGAGTCTTCATGGGGCAATT-GTCACTGCTT 16880 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | || Sbjct 16879 ATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTG 16820 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||| | | ||||||| | | || ||||||||||| | Sbjct 16819 GAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATG 16760 Query 310 CCAATCAAAC 319 ||| || ||| Sbjct 16759 CCACTCGAAC 16750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972408467456