Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq9766 389 6e-106 seq28435 372 5e-101 seq21713 300 2e-79 seq11812 96.9 5e-18 seq36783 86.0 9e-15 seq15820 86.0 9e-15 >seq9766 Length=43015 Score = 389 bits (430), Expect = 6e-106 Identities = 242/256 (95%), Gaps = 3/256 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 38410 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 38353 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 38352 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTTAAAGATTA 38293 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 38292 CCTTGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 38233 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct 38232 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 38173 Query 241 GCCAT-CTCCCTCGAA 255 ||||| |||||| || Sbjct 38172 GCCATAGTCCCTCTAA 38157 >seq28435 Length=1661 Score = 372 bits (412), Expect = 5e-101 Identities = 231/245 (94%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | Sbjct 1133 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 1076 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1075 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 1016 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| ||| ||| |||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 1015 CCCGGGCCTATCGACCAAGGCTATAGACTCGTTGAATACATCAGTGTAACGCGCGTGCGG 956 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 955 CCCAAAACATCTAAGGGCATCACAGACCTATTATTGCCTCAAACTTCCTTGGCCTAAGCA 896 Query 241 GCCAT 245 ||||| Sbjct 895 GCCAT 891 >seq21713 Length=4003 Score = 300 bits (332), Expect = 2e-79 Identities = 182/191 (95%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGG 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1782 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGG 1841 Query 126 ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAG 185 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1842 GCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAG 1901 Query 186 AACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAGGCCAT 245 ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1902 AACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCAT 1961 Query 246 -CTCCCTCGAA 255 |||||| || Sbjct 1962 AGTCCCTCTAA 1972 >seq11812 Length=4105 Score = 96.9 bits (106), Expect = 5e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 24 AACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCA 83 |||| |||||| |||||| | ||||||| | |||| |||||||||||||||||||| | Sbjct 455 AACGTGAGCTT-ATGACTTACACTTACTAAGTATTTA-TCGTTGAAGACCAACAATTGTA 512 Query 84 ATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGA 143 ||||| || | |||||||| |||||||| |||||| || || |||| | Sbjct 513 ATGATTTAATTCTATCACGAT-CAATTTCAAGGATTACTTAAGTCTATCAATCAAGAATA 571 Query 144 TAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCAC 203 | |||| ||||||| || | | ||| || |||| | | |||| || ||| ||||| Sbjct 572 TGAACTCATTGAATATATGACTATAGTGCATGTGCAACTTATAACAACT-AGGATATCAC 630 Query 204 AGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 | | |||| |||| | |||| |||||||| Sbjct 631 ATCTATTTTATCAGCTCAGATTTCCTTGGCCTAA 664 >seq36783 Length=42912 Score = 86.0 bits (94), Expect = 9e-15 Identities = 101/133 (76%), Gaps = 3/133 (2%) Strand=Plus/Plus Query 36 ATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCC 95 ||| || || || ||| |||||| | ||| || ||||||||||||| |||||||||| Sbjct 35666 ATGTCTTGCAGTTGCTACAAATTTCTT-GTTAAA-ACCAACAATTGCAGTGATCTATCCA 35723 Query 96 CATCACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGA 155 ||| || |||||| |||||||| || ||||||| |||| ||| |||||| || Sbjct 35724 TGTCATGAACAAATTTTAAAGATTATTCGAGTTTGTCGGCTAAGGCTATA-ACTCGTCGA 35782 Query 156 ATACATCAGTGTA 168 ||||||| |||| Sbjct 35783 ATACATCCATGTA 35795 >seq15820 Length=41782 Score = 86.0 bits (94), Expect = 9e-15 Identities = 62/69 (90%), Gaps = 2/69 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||| |||||| |||||||||| || |||||||||||| ||||||||||| ||| Sbjct 11990 GTACAAAGGACAGGGATGTAGTCAACGTGAA-TTGATGACTCGCACTTACTAGGAA-TTC 12047 Query 61 CTCGTTGAA 69 ||||||||| Sbjct 12048 CTCGTTGAA 12056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751706793320