Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq21713 122 5e-26
seq9766 122 5e-26
seq680 71.6 8e-11
>seq21713
Length=4003
Score = 122 bits (134), Expect = 5e-26
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||| |||||||| | ||||| | |||||| ||
Sbjct 2249 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 2308
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 2309 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 2365
>seq9766
Length=43015
Score = 122 bits (134), Expect = 5e-26
Identities = 97/117 (83%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
||||||||||||||||||||||| |||||||| | ||||| | |||||| ||
Sbjct 37880 GAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCC 37821
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||| |||||||| ||||| |||| |||||| ||||||||||||||||||||||
Sbjct 37820 AATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGA 37764
>seq680
Length=9511
Score = 71.6 bits (78), Expect = 8e-11
Identities = 56/67 (84%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 51 AACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCG 110
|||||| || |||||||||||| || |||| |||| |||||| || ||||| ||||||
Sbjct 8273 AACATCCACCAATCCCTAGTCGGTATCATTTATGGTTGAGACTAGGATGGTATTTGATCG 8332
Query 111 TCTTCGA 117
|||||||
Sbjct 8333 TCTTCGA 8339
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278294952720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |