Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq15005 197 4e-48 seq23080 87.8 5e-15 seq9098 86.0 2e-14 >seq15005 Length=3975 Score = 197 bits (218), Expect = 4e-48 Identities = 246/334 (74%), Gaps = 10/334 (3%) Strand=Plus/Minus Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67 || ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| | Sbjct 788 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 729 Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124 || ||||||| ||||||||||||| | || ||||||| | | || || ||| Sbjct 728 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 672 Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183 || | | | || |||| | | ||| | | || ||| ||||| | ||||| Sbjct 671 AAGTCGC---CAAAAACTGGTGGAATGCTCTCGAAACCCATTCACTTGAGTGAGACAGAG 615 Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243 | | |||||||| | |||||| ||||||| || |||| | | |||||| |||| || Sbjct 614 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGC 555 Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303 ||||||||| | ||||| || |||||| | ||||||| |||||||| ||| || Sbjct 554 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGG 495 Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||||||||||||||||| ||| |||||||| Sbjct 494 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 461 >seq23080 Length=7422 Score = 87.8 bits (96), Expect = 5e-15 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 |||||| || | |||||| ||||||||| | |||||||||| ||| ||||||||||| Sbjct 2655 GAATAAACATTGACTAACTCTGTGCCAGCAACTGCGGTAATACAAAGGATGCAAGCGTTA 2714 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 ||||| | ||||| |||||||| ||| || | | |||| | | ||||||| Sbjct 2715 TCTGGAATGATTGGGCCTAAAGCGTCTATAGGTGGCTTTTTAAGTCCACCATCAAATCCC 2774 Query 131 CGGGCTTAACC 141 |||||||||| Sbjct 2775 AGGGCTTAACC 2785 >seq9098 Length=5062 Score = 86.0 bits (94), Expect = 2e-14 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247 |||||||| |||||| ||||||| | |||| | | |||||| |||| |||||| Sbjct 3177 GTGGAATTTTGTGTGTAGGGGTGAAATCCAGAGATCTACGAAGGAACGCCAAAAGCGAAG 3118 Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307 | ||| | || || || |||||| | | ||||| ||||| | ||| |||||| Sbjct 3117 GTAGCTCTCTAGGTCCCTACCGACGCTGGGGTGCAAAAGCAAGGGGAACGAACGGGATTA 3058 Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337 ||||||| |||||||| ||| |||||||| Sbjct 3057 GATACCCAAGTAGTCCATGCCGTAAACGAT 3028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289080961792