Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq15005 197 4e-48
seq23080 87.8 5e-15
seq9098 86.0 2e-14
>seq15005
Length=3975
Score = 197 bits (218), Expect = 4e-48
Identities = 246/334 (74%), Gaps = 10/334 (3%)
Strand=Plus/Minus
Query 8 GAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCG 67
|| ||| |||| |||||||||| |||||||||||||||||||| ||| ||| ||||| |
Sbjct 788 GAGGAAGAAGCCCCGGCTAACTCCGTGCCAGCAGCCGCGGTAAGACGGGGGGGGCAAGTG 729
Query 68 TTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGT---TGTGTAAGACAGGTGTGA 124
|| ||||||| ||||||||||||| | || ||||||| | | || || |||
Sbjct 728 TTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAG---TGA 672
Query 125 AATCCCCGGGCTTAACCTGG-GAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAG 183
|| | | | || |||| | | ||| | | || ||| ||||| | |||||
Sbjct 671 AAGTCGC---CAAAAACTGGTGGAATGCTCTCGAAACCCATTCACTTGAGTGAGACAGAG 615
Query 184 GGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGC 243
| | |||||||| | |||||| ||||||| || |||| | | |||||| |||| ||
Sbjct 614 GAGAGTGGAATTTCGTGTGTAGGGGTGAAATCCGGAGATCTACGAAGGAACGCCAAAAGC 555
Query 244 GAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGG 303
||||||||| | ||||| || |||||| | ||||||| |||||||| ||| ||
Sbjct 554 GAAGGCAGCTCTCTGGGTCCCTACCGACGCTGGGGTGCGAAAGCATGGGGAGCGAACGGG 495
Query 304 ATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
||||||||||||||||||||| ||| ||||||||
Sbjct 494 ATTAGATACCCTGGTAGTCCATGCCGTAAACGAT 461
>seq23080
Length=7422
Score = 87.8 bits (96), Expect = 5e-15
Identities = 98/131 (75%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
|||||| || | |||||| ||||||||| | |||||||||| ||| |||||||||||
Sbjct 2655 GAATAAACATTGACTAACTCTGTGCCAGCAACTGCGGTAATACAAAGGATGCAAGCGTTA 2714
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
||||| | ||||| |||||||| ||| || | | |||| | | |||||||
Sbjct 2715 TCTGGAATGATTGGGCCTAAAGCGTCTATAGGTGGCTTTTTAAGTCCACCATCAAATCCC 2774
Query 131 CGGGCTTAACC 141
||||||||||
Sbjct 2775 AGGGCTTAACC 2785
>seq9098
Length=5062
Score = 86.0 bits (94), Expect = 2e-14
Identities = 109/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 188 GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAG 247
|||||||| |||||| ||||||| | |||| | | |||||| |||| ||||||
Sbjct 3177 GTGGAATTTTGTGTGTAGGGGTGAAATCCAGAGATCTACGAAGGAACGCCAAAAGCGAAG 3118
Query 248 GCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTA 307
| ||| | || || || |||||| | | ||||| ||||| | ||| ||||||
Sbjct 3117 GTAGCTCTCTAGGTCCCTACCGACGCTGGGGTGCAAAAGCAAGGGGAACGAACGGGATTA 3058
Query 308 GATACCCTGGTAGTCCACGCCCTAAACGAT 337
||||||| |||||||| ||| ||||||||
Sbjct 3057 GATACCCAAGTAGTCCATGCCGTAAACGAT 3028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289080961792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |