Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq22748 93.3 4e-17 seq1391 78.8 1e-12 seq17896 75.2 1e-11 >seq22748 Length=18834 Score = 93.3 bits (102), Expect = 4e-17 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| | Sbjct 13391 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 13334 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 13333 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 13284 >seq1391 Length=23006 Score = 78.8 bits (86), Expect = 1e-12 Identities = 114/160 (71%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84 |||| |||||| || | ||| || |||| ||| || |||| ||| ||||| Sbjct 5109 AAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGTGAGACAATTCTCTCTAAGG 5050 Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144 |||| |||||| | |||||||||||||||| || | || | | || ||| || || Sbjct 5049 AACTCGGCAAAATAGCCCTGTAACTTCGGGAGAAGGAGTGCTGCCTCACAAA--GGGGGT 4992 Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACA 184 | || || |||| | |||||||||||| |||||||||| Sbjct 4991 CCTAGTGACTAGGCCTGGGCAACTGTTTACCAAAAACACA 4952 >seq17896 Length=32685 Score = 75.2 bits (82), Expect = 1e-11 Identities = 77/100 (77%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 90 GGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAG 149 |||||| | ||| |||||||||||| || |||| ||| | || ||| ||| | |||| Sbjct 26072 GGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGG--GTTGCAG 26129 Query 150 AGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 || ||| || ||| |||||||| |||||||||||| || Sbjct 26130 TGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 26169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530992883792