Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000567.1
Length=197
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 93.3 4e-17
seq1391 78.8 1e-12
seq17896 75.2 1e-11
>seq22748
Length=18834
Score = 93.3 bits (102), Expect = 4e-17
Identities = 87/110 (79%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139
||||||||| |||||| | ||| |||||||||||| || |||| ||| | || ||| |
Sbjct 13391 TAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAA--G 13334
Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
| || ||||| || ||| || ||| |||||||| |||||||||||| ||
Sbjct 13333 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 13284
>seq1391
Length=23006
Score = 78.8 bits (86), Expect = 1e-12
Identities = 114/160 (71%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 25 AAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAGG 84
|||| |||||| || | ||| || |||| ||| || |||| ||| |||||
Sbjct 5109 AAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGTGAGACAATTCTCTCTAAGG 5050
Query 85 AACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGG 144
|||| |||||| | |||||||||||||||| || | || | | || ||| || ||
Sbjct 5049 AACTCGGCAAAATAGCCCTGTAACTTCGGGAGAAGGAGTGCTGCCTCACAAA--GGGGGT 4992
Query 145 CGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACA 184
| || || |||| | |||||||||||| ||||||||||
Sbjct 4991 CCTAGTGACTAGGCCTGGGCAACTGTTTACCAAAAACACA 4952
>seq17896
Length=32685
Score = 75.2 bits (82), Expect = 1e-11
Identities = 77/100 (77%), Gaps = 2/100 (2%)
Strand=Plus/Plus
Query 90 GGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGAGGGCGCAG 149
|||||| | ||| |||||||||||| || |||| ||| | || ||| ||| | ||||
Sbjct 26072 GGCAAAATAGCCCCGTAACTTCGGGAGAAGGGGTGCCTCCTCACAAAGGGG--GTTGCAG 26129
Query 150 AGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189
|| ||| || ||| |||||||| |||||||||||| ||
Sbjct 26130 TGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 26169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530992883792
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |