Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq22748 87.8 2e-15 seq17896 80.6 3e-13 >seq22748 Length=18834 Score = 87.8 bits (96), Expect = 2e-15 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106 ||||| || |||||||| ||||||||||| |||||||||| ||| ||||| || Sbjct 13331 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 13272 Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| | |||| ||| |||||||||||| |||||||||||| || Sbjct 13271 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 13226 >seq17896 Length=32685 Score = 80.6 bits (88), Expect = 3e-13 Identities = 73/92 (79%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116 |||||||| ||||||||||| |||||||||| ||| ||||| || ||| | || Sbjct 26132 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 26191 Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGG 148 || ||| |||||||||||| ||||||||||| Sbjct 26192 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGG 26223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476614094488