Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000599.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 87.8 2e-15
seq17896 80.6 3e-13
>seq22748
Length=18834
Score = 87.8 bits (96), Expect = 2e-15
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 47 GGTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA 106
||||| || |||||||| ||||||||||| |||||||||| ||| ||||| ||
Sbjct 13331 GGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGT 13272
Query 107 AAGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152
||| | |||| ||| |||||||||||| |||||||||||| ||
Sbjct 13271 AAGACCATGTATGGGGGCTGACGCCTGCCCAGTGCCGGAAGGTCAA 13226
>seq17896
Length=32685
Score = 80.6 bits (88), Expect = 3e-13
Identities = 73/92 (79%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 57 ACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGT 116
|||||||| ||||||||||| |||||||||| ||| ||||| || ||| | ||
Sbjct 26132 ACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCTCCGCAAAGTCGTAAGACCATGT 26191
Query 117 ATAGGGTGTGACGCCTGCCCGGTGCCGGAAGG 148
|| ||| |||||||||||| |||||||||||
Sbjct 26192 ATGGGGGCTGACGCCTGCCCAGTGCCGGAAGG 26223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476614094488
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |