Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 255 1e-65
seq1391 183 8e-44
seq38098 145 2e-32
seq17463 129 1e-27
seq3574 127 5e-27
seq12662 122 2e-25
seq17896 120 8e-25
seq16212 109 1e-21
seq3602 89.7 1e-15
>seq22748
Length=18834
Score = 255 bits (282), Expect = 1e-65
Identities = 305/418 (73%), Gaps = 27/418 (6%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
|||||||||||| || || ||||||| ||| ||| ||||||| ||| ||||||
Sbjct 13040 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 13099
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||| | |||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 13100 ACGCCTTTCGTACGGGTCGGAACTTACCTGACAAGGAATTTCGCTAACTTAGGACCGTTA 13159
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||||||||||||| |||||||||||| || ||| | | | || | |||
Sbjct 13160 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 13219
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| || |||||||||||| |||||||||||| ||| |||| | ||| || |||
Sbjct 13220 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 13279
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
|| ||| |||||||||| ||||||||||| |||||||| || |||||
Sbjct 13280 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 13333
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | ||| | ||||||||||||||||||| || ||
Sbjct 13334 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 13376
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| ||||| |||| || ||| ||||||||||||| | ||||
Sbjct 13377 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 13434
Score = 82.4 bits (90), Expect = 2e-13
Identities = 72/90 (80%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396
||| | ||||||||||||||||||| || ||||||| |||||||| ||||| |||
Sbjct 15300 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 15359
Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426
| || ||| ||||||||||||| | ||||
Sbjct 15360 CGCGCCCCTAGGTATTCTCTACCTACCCAC 15389
>seq1391
Length=23006
Score = 183 bits (202), Expect = 8e-44
Identities = 289/418 (69%), Gaps = 27/418 (6%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||||||| || | ||||||| || ||| | ||||||| ||| || |||
Sbjct 4703 GCATCTTCACAAGCATGTTTATTTCACCAAGCCTCTCTTTGAGACAGTGCCCAGATTGTT 4762
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4763 ACGCCTTTCGTGCGGGTCAAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4822
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188
| ||||| | |||| || || | |||||| ||| ||| | | | || | |||
Sbjct 4823 TAGTTACAGTCGCCTTTCACTGAGGCTTCCGTCACCGGCTCCCCTATCATCAGGTCACCA 4882
Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248
| |||||||||| |||| |||||||||||| | | |||| | ||| || |||
Sbjct 4883 ACTTCCTTAACCTTCCAGCACTGGGCAGGCGTCAACCACCATACATGGTCTTACGACTTT 4942
Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308
||| ||||||||| |||||||| || ||||| || || ||||
Sbjct 4943 ATGGAGACTTGTGTTTTTGGTAAACAGTTGCCCAGGCCTAGTCACTAGGACC------CC 4996
Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368
||| ||| | || | ||||||||||||||||| | || ||
Sbjct 4997 CTTTGTGAG-----------------GCAGCACTCCTTCTCCCGAAGTTACAGGGCTATT 5039
Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
||||| |||||||| || || ||||| || ||| ||||||||||||| | ||||
Sbjct 5040 TTGCCGAGTTCCTTAGAGAGAATTGTCTCACGCCCCTAGGTATTCTCTACCTACCCAC 5097
>seq38098
Length=37492
Score = 145 bits (160), Expect = 2e-32
Identities = 135/169 (80%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGG-GT-GGAGACAGCGCCG 64
||| | ||||||||| || || ||||||||||||||| || || ||| |||| | |
Sbjct 2811 TACTCCGCATCTTCATAGAGAATTCAATTTCACTGAGGGTCCATGTCGGAAACAGTGGGG 2870
Query 65 CCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124
| ||||||| |||||| ||||||||| ||||| |||||| |||||||||||||||||
Sbjct 2871 CAGTCGTTACACCATTCATGCAGGTCGCTACTTATGCGACAAAGAATTTCGCTACCTTAG 2930
Query 125 GACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173
||| |||| ||||| || |||||||||| ||||||| || | |||||
Sbjct 2931 GACAGTTAGAGTTACTGCTGCCGTTTACCAGGGCTTCCATTCAAAGCTT 2979
>seq17463
Length=17885
Score = 129 bits (142), Expect = 1e-27
Identities = 279/419 (67%), Gaps = 35/419 (8%)
Strand=Plus/Plus
Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71
|||||||||| || |||||||||||| ||| |||||| || |||||
Sbjct 5896 TGCATCTTCATAGA------AATTTCACTGAGGCTCTCTCCGAGACAATGCTTAGATCGT 5949
Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
||| | ||| ||| |||| |||||||||||||||||||||| ||||||||||||| ||
Sbjct 5950 TACACGTTTCATGCGGGTCAAAACTTACCCGACAAGGAATTTCACTACCTTAGGACCATT 6009
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACC 187
|| ||||| | ||| || | | ||||||| || ||| | | | || | |||
Sbjct 6010 ATAGTTACAACTGCCATTCATTGAGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACC 6069
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
| || ||||| ||||| ||||||||||| ||| |||| | ||| || ||
Sbjct 6070 AACTTCTTTGACCTTTTGGCACTGGGCAGGCGTCCGTCCCCATACATGGTCTTACGACTT 6129
Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307
||| || |||||||||| ||||||||| | || |||| || |||||
Sbjct 6130 TGCGAAGACCTGTGTTTTT-GTAAACAGTCACCTGAGCTTGGTCACTACGACC------C 6182
Query 308 GCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTT 367
||| ||| | | ||| ||||||| | ||||||||| | ||
Sbjct 6183 TCTTTGTGAGGAGG-----CAC-------------CCTTCTCACAAAGTTACGGGGTTTT 6224
Query 368 TTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426
|||||| |||||||| ||||| ||| | ||| ||||||||||||| | ||||
Sbjct 6225 TTTGCCAAGTTCCTTAGAGAGAGTTGTCTGGCACCCCTAGGTATTCTCTACCTACCCAC 6283
>seq3574
Length=40537
Score = 127 bits (140), Expect = 5e-27
Identities = 118/150 (79%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72
||||||||| || || || ||||||| || ||| || ||| ||| ||||||
Sbjct 36777 GCATCTTCATAGACATGTCTATTTCACCAAGCCTCTTTCTAAGGCAGTGCCCAGATCGTT 36836
Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132
||||| ||||||| ||| ||||||||||| |||||||||||||||| ||||| |||||||
Sbjct 36837 ACGCCTTTCGTGCGGGTTGGAACTTACCCAACAAGGAATTTCGCTATCTTAGAACCGTTA 36896
Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCG 162
| |||||| ||||| || ||| || ||||
Sbjct 36897 TAGTTACGACCGCCATTCACCAGGATTTCG 36926
>seq12662
Length=54041
Score = 122 bits (134), Expect = 2e-25
Identities = 114/145 (79%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 29 TTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGG 88
|||| |||||| ||| | |||||||||| || | ||||| |||||||||||||
Sbjct 43690 TTCATTTTCACCCGGTCCATGTCGGAGACAGCGAGGCAGTTGTTACACCATTCGTGCAGG 43631
Query 89 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGT 148
||| ||||| |||||||||||||||||| |||||| |||| ||||| ||||||||
Sbjct 43630 TCGCTACTTATGTGACAAGGAATTTCGCTACTGTAGGACAGTTAGAGTTACTGCCGCCGT 43571
Query 149 TTACCGGGGCTTCGATCAAGAGCTT 173
||||| ||||||| || | |||||
Sbjct 43570 TTACCAGGGCTTCCATTCAAAGCTT 43546
>seq17896
Length=32685
Score = 120 bits (132), Expect = 8e-25
Identities = 134/179 (75%), Gaps = 4/179 (2%)
Strand=Plus/Minus
Query 116 CTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG 175
|||||||||||||||||| ||||||||||||||| |||||||||||| || ||| |
Sbjct 26310 CTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCC 26251
Query 176 CGTT----AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATA 231
| | || | ||| | | ||||||||||| |||||||||||| ||| |||
Sbjct 26250 CTGTCATCAGGTCACCAACTTCCCTGGCCTTCCGGCACTGGGCAGGCGTCAGCCCCCATA 26191
Query 232 CGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290
| | ||| || ||||| ||| |||||||||| ||||||||||| ||||||||
Sbjct 26190 CATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGT 26132
>seq16212
Length=7067
Score = 109 bits (120), Expect = 1e-21
Identities = 195/283 (69%), Gaps = 4/283 (1%)
Strand=Plus/Plus
Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71
|||||||| | || || || ||||||| || ||| | |||| || ||| || ||
Sbjct 1539 TGCATCTTTATAGATATGTCTATTTCACCGATCCTCCCATCGAGATAGTGCCCAAATTGT 1598
Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131
||| | | | | ||||| ||||||||||||||| ||||| |||||||||||||||||
Sbjct 1599 TACACGTTATGAGTGGGTCGCAACTTACCCGACAAGAAATTTTGCTACCTTAGGACCGTT 1658
Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACC 187
||| ||||| ||| || ||| |||| || || | || | | || | | | |||
Sbjct 1659 ATTATTACGATTGCCATTCACCAAGGCTCCGGTCGTCAACTCCCCTGTCATCAAGTCACC 1718
Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247
| || |||||| ||||| || ||| |||| ||| |||| | || || ||
Sbjct 1719 AACTTCCTTGACCTTCTGGCACTAGGGAGGTGTCAGCCCCCATACATGGTCTAACGACTT 1778
Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290
|| ||| ||||||||| |||||||| | | ||| ||||
Sbjct 1779 TGTGGAGACTTGTGTTTTTGGTAAACAGTTGTTGGGGCTTGGT 1821
>seq3602
Length=31274
Score = 89.7 bits (98), Expect = 1e-15
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138
|| ||||| || ||||||||||||||||| |||||||||||||||||||| || | ||||
Sbjct 20294 TTTGTGCAAGTTGGAACTTACCCGACAAGCAATTTCGCTACCTTAGGACCATTCTAGTTA 20235
Query 139 CGGCCGCCGTTTAC 152
||| ||| ||| ||
Sbjct 20234 CGGTCGCTGTTCAC 20221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260292553216
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