Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq22748 255 1e-65 seq1391 183 8e-44 seq38098 145 2e-32 seq17463 129 1e-27 seq3574 127 5e-27 seq12662 122 2e-25 seq17896 120 8e-25 seq16212 109 1e-21 seq3602 89.7 1e-15 >seq22748 Length=18834 Score = 255 bits (282), Expect = 1e-65 Identities = 305/418 (73%), Gaps = 27/418 (6%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||||| || || ||||||| ||| ||| ||||||| ||| |||||| Sbjct 13040 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 13099 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||| | |||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 13100 ACGCCTTTCGTACGGGTCGGAACTTACCTGACAAGGAATTTCGCTAACTTAGGACCGTTA 13159 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||||||||||||| |||||||||||| || ||| | | | || | ||| Sbjct 13160 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 13219 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | || |||||||||||| |||||||||||| ||| |||| | ||| || ||| Sbjct 13220 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 13279 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 || ||| |||||||||| ||||||||||| |||||||| || ||||| Sbjct 13280 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACC------CC 13333 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | ||| | ||||||||||||||||||| || || Sbjct 13334 CTTTGTGAGGA-----------------GGCACCCCTTCTCCCGAAGTTACGGGGCTATT 13376 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| ||||| |||| || ||| ||||||||||||| | |||| Sbjct 13377 TTGCCGAGTTCCTTAGAGAGAGTTGTCTCGCGCCCCTAGGTATTCTCTACCTACCCAC 13434 Score = 82.4 bits (90), Expect = 2e-13 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 337 GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCT 396 ||| | ||||||||||||||||||| || ||||||| |||||||| ||||| ||| Sbjct 15300 GGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTAGAGAGAGTTGTCT 15359 Query 397 CAAGCGCCTTGGTATTCTCTACCCAACCAC 426 | || ||| ||||||||||||| | |||| Sbjct 15360 CGCGCCCCTAGGTATTCTCTACCTACCCAC 15389 >seq1391 Length=23006 Score = 183 bits (202), Expect = 8e-44 Identities = 289/418 (69%), Gaps = 27/418 (6%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||||| || | ||||||| || ||| | ||||||| ||| || ||| Sbjct 4703 GCATCTTCACAAGCATGTTTATTTCACCAAGCCTCTCTTTGAGACAGTGCCCAGATTGTT 4762 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4763 ACGCCTTTCGTGCGGGTCAAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4822 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACCC 188 | ||||| | |||| || || | |||||| ||| ||| | | | || | ||| Sbjct 4823 TAGTTACAGTCGCCTTTCACTGAGGCTTCCGTCACCGGCTCCCCTATCATCAGGTCACCA 4882 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | |||||||||| |||| |||||||||||| | | |||| | ||| || ||| Sbjct 4883 ACTTCCTTAACCTTCCAGCACTGGGCAGGCGTCAACCACCATACATGGTCTTACGACTTT 4942 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAG 308 ||| ||||||||| |||||||| || ||||| || || |||| Sbjct 4943 ATGGAGACTTGTGTTTTTGGTAAACAGTTGCCCAGGCCTAGTCACTAGGACC------CC 4996 Query 309 CTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTT 368 ||| ||| | || | ||||||||||||||||| | || || Sbjct 4997 CTTTGTGAG-----------------GCAGCACTCCTTCTCCCGAAGTTACAGGGCTATT 5039 Query 369 TTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||||| |||||||| || || ||||| || ||| ||||||||||||| | |||| Sbjct 5040 TTGCCGAGTTCCTTAGAGAGAATTGTCTCACGCCCCTAGGTATTCTCTACCTACCCAC 5097 >seq38098 Length=37492 Score = 145 bits (160), Expect = 2e-32 Identities = 135/169 (80%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGG-GT-GGAGACAGCGCCG 64 ||| | ||||||||| || || ||||||||||||||| || || ||| |||| | | Sbjct 2811 TACTCCGCATCTTCATAGAGAATTCAATTTCACTGAGGGTCCATGTCGGAAACAGTGGGG 2870 Query 65 CCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 124 | ||||||| |||||| ||||||||| ||||| |||||| ||||||||||||||||| Sbjct 2871 CAGTCGTTACACCATTCATGCAGGTCGCTACTTATGCGACAAAGAATTTCGCTACCTTAG 2930 Query 125 GACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTT 173 ||| |||| ||||| || |||||||||| ||||||| || | ||||| Sbjct 2931 GACAGTTAGAGTTACTGCTGCCGTTTACCAGGGCTTCCATTCAAAGCTT 2979 >seq17463 Length=17885 Score = 129 bits (142), Expect = 1e-27 Identities = 279/419 (67%), Gaps = 35/419 (8%) Strand=Plus/Plus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||| || |||||||||||| ||| |||||| || ||||| Sbjct 5896 TGCATCTTCATAGA------AATTTCACTGAGGCTCTCTCCGAGACAATGCTTAGATCGT 5949 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| | ||| ||| |||| |||||||||||||||||||||| ||||||||||||| || Sbjct 5950 TACACGTTTCATGCGGGTCAAAACTTACCCGACAAGGAATTTCACTACCTTAGGACCATT 6009 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCT----TCGCGTTAGCTAACC 187 || ||||| | ||| || | | ||||||| || ||| | | | || | ||| Sbjct 6010 ATAGTTACAACTGCCATTCATTGAGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACC 6069 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 | || ||||| ||||| ||||||||||| ||| |||| | ||| || || Sbjct 6070 AACTTCTTTGACCTTTTGGCACTGGGCAGGCGTCCGTCCCCATACATGGTCTTACGACTT 6129 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGA 307 ||| || |||||||||| ||||||||| | || |||| || ||||| Sbjct 6130 TGCGAAGACCTGTGTTTTT-GTAAACAGTCACCTGAGCTTGGTCACTACGACC------C 6182 Query 308 GCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTT 367 ||| ||| | | ||| ||||||| | ||||||||| | || Sbjct 6183 TCTTTGTGAGGAGG-----CAC-------------CCTTCTCACAAAGTTACGGGGTTTT 6224 Query 368 TTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 |||||| |||||||| ||||| ||| | ||| ||||||||||||| | |||| Sbjct 6225 TTTGCCAAGTTCCTTAGAGAGAGTTGTCTGGCACCCCTAGGTATTCTCTACCTACCCAC 6283 >seq3574 Length=40537 Score = 127 bits (140), Expect = 5e-27 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 ||||||||| || || || ||||||| || ||| || ||| ||| |||||| Sbjct 36777 GCATCTTCATAGACATGTCTATTTCACCAAGCCTCTTTCTAAGGCAGTGCCCAGATCGTT 36836 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 ||||| ||||||| ||| ||||||||||| |||||||||||||||| ||||| ||||||| Sbjct 36837 ACGCCTTTCGTGCGGGTTGGAACTTACCCAACAAGGAATTTCGCTATCTTAGAACCGTTA 36896 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCG 162 | |||||| ||||| || ||| || |||| Sbjct 36897 TAGTTACGACCGCCATTCACCAGGATTTCG 36926 >seq12662 Length=54041 Score = 122 bits (134), Expect = 2e-25 Identities = 114/145 (79%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 29 TTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCCATTCGTGCAGG 88 |||| |||||| ||| | |||||||||| || | ||||| ||||||||||||| Sbjct 43690 TTCATTTTCACCCGGTCCATGTCGGAGACAGCGAGGCAGTTGTTACACCATTCGTGCAGG 43631 Query 89 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGT 148 ||| ||||| |||||||||||||||||| |||||| |||| ||||| |||||||| Sbjct 43630 TCGCTACTTATGTGACAAGGAATTTCGCTACTGTAGGACAGTTAGAGTTACTGCCGCCGT 43571 Query 149 TTACCGGGGCTTCGATCAAGAGCTT 173 ||||| ||||||| || | ||||| Sbjct 43570 TTACCAGGGCTTCCATTCAAAGCTT 43546 >seq17896 Length=32685 Score = 120 bits (132), Expect = 8e-25 Identities = 134/179 (75%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 116 CTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCG 175 |||||||||||||||||| ||||||||||||||| |||||||||||| || ||| | Sbjct 26310 CTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCC 26251 Query 176 CGTT----AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATA 231 | | || | ||| | | ||||||||||| |||||||||||| ||| ||| Sbjct 26250 CTGTCATCAGGTCACCAACTTCCCTGGCCTTCCGGCACTGGGCAGGCGTCAGCCCCCATA 26191 Query 232 CGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 | | ||| || ||||| ||| |||||||||| ||||||||||| |||||||| Sbjct 26190 CATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGT 26132 >seq16212 Length=7067 Score = 109 bits (120), Expect = 1e-21 Identities = 195/283 (69%), Gaps = 4/283 (1%) Strand=Plus/Plus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||| | || || || ||||||| || ||| | |||| || ||| || || Sbjct 1539 TGCATCTTTATAGATATGTCTATTTCACCGATCCTCCCATCGAGATAGTGCCCAAATTGT 1598 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||| | | | | ||||| ||||||||||||||| ||||| ||||||||||||||||| Sbjct 1599 TACACGTTATGAGTGGGTCGCAACTTACCCGACAAGAAATTTTGCTACCTTAGGACCGTT 1658 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGC-GTTAGC---TAACC 187 ||| ||||| ||| || ||| |||| || || | || | | || | | | ||| Sbjct 1659 ATTATTACGATTGCCATTCACCAAGGCTCCGGTCGTCAACTCCCCTGTCATCAAGTCACC 1718 Query 188 CCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 247 | || |||||| ||||| || ||| |||| ||| |||| | || || || Sbjct 1719 AACTTCCTTGACCTTCTGGCACTAGGGAGGTGTCAGCCCCCATACATGGTCTAACGACTT 1778 Query 248 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGT 290 || ||| ||||||||| |||||||| | | ||| |||| Sbjct 1779 TGTGGAGACTTGTGTTTTTGGTAAACAGTTGTTGGGGCTTGGT 1821 >seq3602 Length=31274 Score = 89.7 bits (98), Expect = 1e-15 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138 || ||||| || ||||||||||||||||| |||||||||||||||||||| || | |||| Sbjct 20294 TTTGTGCAAGTTGGAACTTACCCGACAAGCAATTTCGCTACCTTAGGACCATTCTAGTTA 20235 Query 139 CGGCCGCCGTTTAC 152 ||| ||| ||| || Sbjct 20234 CGGTCGCTGTTCAC 20221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260292553216