Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 325 8e-87
seq1391 275 1e-71
seq17463 196 1e-47
seq17896 183 6e-44
seq16212 158 3e-36
seq3574 154 3e-35
seq38098 118 2e-24
seq6239 102 2e-19
seq12662 100 6e-19
seq10925 100 6e-19
seq2134 95.1 3e-17
seq3602 93.3 9e-17
seq3500 86.0 1e-14
>seq22748
Length=18834
Score = 325 bits (360), Expect = 8e-87
Identities = 290/359 (81%), Gaps = 8/359 (2%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
|| || |||||||||| | || | ||||||||||| || | |||||||||||||
Sbjct 13034 TAGCCCGCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAG 13093
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct 13094 ATCGTTACGCCTTTCGTACGGGTCGGAACTTACCTGACAAGGAATTTCGCTAACTTAGGA 13153
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC--- 176
||||||||||||||||||||||| || ||||||| || | ||| | | | ||
Sbjct 13154 CCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGG 13213
Query 177 TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGC 236
| || | |||| ||||||| |||| |||||||||||||| || |||||| ||||| |
Sbjct 13214 TCACCAACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTAC 13273
Query 237 GACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GC 293
||||| || || ||||||||||||||||||||||||| |||||| || ||||| |
Sbjct 13274 GACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCC 13333
Query 294 CTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| | || |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 13334 CTTTGTGAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 13391
Score = 73.4 bits (80), Expect = 8e-11
Identities = 45/48 (94%), Gaps = 0/48 (0%)
Strand=Plus/Plus
Query 305 AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 15299 AGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 15346
>seq1391
Length=23006
Score = 275 bits (304), Expect = 1e-71
Identities = 275/353 (78%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || |||||||| || || | ||||||||||||||| || |||
Sbjct 4703 GCATCTTCACAAGCATGTTTATTTCACCAAGCCTCTCTTTGAGACAGTGCCCAGATTGTT 4762
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4763 ACGCCTTTCGTGCGGGTCAAAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4822
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||| | |||| || |||| ||||| || | ||| | | | || | ||
Sbjct 4823 TAGTTACAGTCGCCTTTCACTGAGGCTTCCGTCACCGGCTCCCCTATCATCAGGTCACCA 4882
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| ||||||||||||||||| |||||||||||| | | |||||| ||||| ||||||
Sbjct 4883 ACTTCCTTAACCTTCCAGCACTGGGCAGGCGTCAACCACCATACATGGTCTTACGACTTT 4942
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCT---GCGGCCTGTCA 299
|| || ||||||||||||||||||| || |||||| || || | ||| |
Sbjct 4943 ATGGAGACTTGTGTTTTTGGTAAACAGTTGCCCAGGCCTAGTCACTAGGACCCCCTTTGT 5002
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| || |||| ||||||||| ||||||| ||| ||||||||||||||||||
Sbjct 5003 GAGGCA-GCACTCCTTCTCCCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTA 5054
>seq17463
Length=17885
Score = 196 bits (216), Expect = 1e-47
Identities = 248/336 (74%), Gaps = 14/336 (4%)
Strand=Plus/Plus
Query 26 AATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCG 85
|||||||| ||| || | |||||| ||| | |||||||| | |||| ||||||||
Sbjct 5910 AATTTCACTGAGGCTCTCTCCGAGACAATGCTTAGATCGTTACACGTTTCATGCGGGTCA 5969
Query 86 GAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTA 145
|||||||||||||||||||||| ||||||||||||| |||||||||| | ||| || |
Sbjct 5970 AAACTTACCCGACAAGGAATTTCACTACCTTAGGACCATTATAGTTACAACTGCCATTCA 6029
Query 146 CTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACAGATCCCC-------TTAACCTTCC 198
|| ||||| || | ||| | | | | ||| || || || |||||
Sbjct 6030 TTGAGGCTTCGGTCGCCGGCTCCCCTGTC---ATCAGGTCACCAACTTCTTTGACCTTTT 6086
Query 199 AGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTT 258
|||| ||||||||||| | || |||||| ||||| |||||| || | ||||||||||
Sbjct 6087 GGCACTGGGCAGGCGTCCGTCCCCATACATGGTCTTACGACTTTGCGAAGACCTGTGTTT 6146
Query 259 TTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG-GCCTGTCATAGA-CAGGCACCCCTTC 316
|| |||||||||| | || || | || || || ||| | || ||||| ||||||
Sbjct 6147 TT-GTAAACAGTCACCTGAGCTTGGTCACTACGACCCTCTTTGTGAGGAGGCA-CCCTTC 6204
Query 317 TCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| | |||||||||||| ||||||| |||||||||
Sbjct 6205 TCACAAAGTTACGGGGTTTTTTTGCCAAGTTCCTTA 6240
>seq17896
Length=32685
Score = 183 bits (202), Expect = 6e-44
Identities = 188/242 (78%), Gaps = 8/242 (3%)
Strand=Plus/Minus
Query 110 CTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG 169
|||||||||||||||||||||||||||||||||| || ||||||| || | ||| |
Sbjct 26310 CTACCTTAGGACCGTTATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCC 26251
Query 170 ATTGC-TC---TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATA 225
| | || | || | || | |||||| |||| |||||||||||||| || |||
Sbjct 26250 CTGTCATCAGGTCACCAACTTCCCTGGCCTTCCGGCACTGGGCAGGCGTCAGCCCCCATA 26191
Query 226 CATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTC 285
||| ||||| |||||| || || ||||||||||||||||||||||||| |||||| ||
Sbjct 26190 CATGGTCTTACGACTTTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTC 26131
Query 286 TCTG---CGGCCTGTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342
||| | ||| | || |||||||||||||||| ||||||||||| ||||||||
Sbjct 26130 ACTGCAACCCCCTTTGTGAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCC 26072
Query 343 GA 344
||
Sbjct 26071 GA 26070
>seq16212
Length=7067
Score = 158 bits (174), Expect = 3e-36
Identities = 233/326 (71%), Gaps = 8/326 (2%)
Strand=Plus/Plus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
|||||||||| || | |||| ||||||||||| ||||| | || | | ||||||
Sbjct 1560 ATTTCACCGATCCTCCCATCGAGATAGTGCCCAAATTGTTACACGTTATGAGTGGGTCGC 1619
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTAC 146
||||||||||||||| ||||| ||||||||||||||||||| ||||| ||| || ||
Sbjct 1620 AACTTACCCGACAAGAAATTTTGCTACCTTAGGACCGTTATTATTACGATTGCCATTCAC 1679
Query 147 TGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAGATCCCCTTAACCTTCCAGCA 202
|||| || | || | | | || | || | |||| |||||| |||
Sbjct 1680 CAAGGCTCCGGTCGTCAACTCCCCTGTCATCAAGTCACCAACTTCCTTGACCTTCTGGCA 1739
Query 203 CCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGG 262
| || ||| |||||| || |||||| |||| |||||| | || || |||||||||||
Sbjct 1740 CTAGGGAGGTGTCAGCCCCCATACATGGTCTAACGACTTTGTGGAGACTTGTGTTTTTGG 1799
Query 263 TAAACAGTCGCTTGGGCCTATTCTCTG---CGGCCTGTCATAGACAGGCACCCCTTCTCC 319
|||||||| | | |||| | || ||| | ||| | || || |||||||||||
Sbjct 1800 TAAACAGTTGTTGGGGCTTGGTCACTGTGACCACCTTTGTGAG-GAGACACCCCTTCTCT 1858
Query 320 CTAAGTTACGGGGTCATTTTGCCGAG 345
| || |||||| | |||||||||||
Sbjct 1859 CGAAATTACGGAGCTATTTTGCCGAG 1884
>seq3574
Length=40537
Score = 154 bits (170), Expect = 3e-35
Identities = 118/140 (84%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
||||||||| | || | |||||||| || || || | || ||||||||| ||||||
Sbjct 36777 GCATCTTCATAGACATGTCTATTTCACCAAGCCTCTTTCTAAGGCAGTGCCCAGATCGTT 36836
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||| ||||||||||| |||||||||||||||| ||||| |||||||
Sbjct 36837 ACGCCTTTCGTGCGGGTTGGAACTTACCCAACAAGGAATTTCGCTATCTTAGAACCGTTA 36896
Query 127 TAGTTACGGCCGCCGTTTAC 146
|||||||| ||||| || ||
Sbjct 36897 TAGTTACGACCGCCATTCAC 36916
>seq38098
Length=37492
Score = 118 bits (130), Expect = 2e-24
Identities = 128/169 (76%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAG--TCTATTGTTGAGACAGTGCCC 58
||| | ||||||||| | || | ||||||||| ||| || || || ||||||
Sbjct 2811 TACTCCGCATCTTCATAGAGAATTCAATTTCACTGAGGGTCCATGTCGGAAACAGTGGGG 2870
Query 59 AAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAG 118
| ||||||| || ||| ||| ||||| ||||| |||||| |||||||||||||||||
Sbjct 2871 CAGTCGTTACACCATTCATGCAGGTCGCTACTTATGCGACAAAGAATTTCGCTACCTTAG 2930
Query 119 GACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT 167
||| |||| |||||| || ||||||||| |||||| |||| ||||
Sbjct 2931 GACAGTTAGAGTTACTGCTGCCGTTTACCAGGGCTTCCATTCAAAGCTT 2979
>seq6239
Length=10369
Score = 102 bits (112), Expect = 2e-19
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 8 CATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTA 67
|||||||| | || | |||||||| || | | | ||||| ||||||||||||||
Sbjct 7270 CATCTTCATAGACATGTCTATTTCACCAAGCATCTCTCTAAGACAATGCCCAAATCGTTA 7211
Query 68 CGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTAT 127
| ||||| || ||||| |||||| | ||||| ||||| || ||||||||||| ||||
Sbjct 7210 CACCTTTTGTATGGGTCAAAACTTATTCAACAAGAAATTTTGCAACCTTAGGACCATTAT 7151
Query 128 AGTTACGGCCG 138
|||||| ||||
Sbjct 7150 AGTTACAGCCG 7140
>seq12662
Length=54041
Score = 100 bits (110), Expect = 6e-19
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 25 CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTC 84
|| ||||||| ||| || ||||||| | | | ||||| || ||||||| ||||
Sbjct 43688 CATTTTCACCCGGTCCATGTCGGAGACAGCGAGGCAGTTGTTACACCATTCGTGCAGGTC 43629
Query 85 GGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTT 144
| ||||| |||||||||||||||||| |||||| |||| |||||| ||||||||||
Sbjct 43628 GCTACTTATGTGACAAGGAATTTCGCTACTGTAGGACAGTTAGAGTTACTGCCGCCGTTT 43569
Query 145 ACTGGGGCTTAAGTTCACTGCTT 167
|| |||||| |||| ||||
Sbjct 43568 ACCAGGGCTTCCATTCAAAGCTT 43546
>seq10925
Length=4399
Score = 100 bits (110), Expect = 6e-19
Identities = 75/87 (86%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||| || |
Sbjct 4121 CCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTATGACTTTGC-G 4063
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273
|||||||||||||||||||||||||
Sbjct 4062 TGACCTGTGTTTTTGGTAAACAGTCGC 4036
>seq2134
Length=57433
Score = 95.1 bits (104), Expect = 3e-17
Identities = 73/87 (84%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||| |||||| |||| ||||| | |||||| | |||||| ||||| |||||| || |
Sbjct 57225 CCTTGACCTTCTGGCACTGGGCATGTGTCAGCCTCCATACATGGTCTTACGACTTTGCGG 57166
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273
| |||||||||||||||||||||||||
Sbjct 57165 AGACCTGTGTTTTTGGTAAACAGTCGC 57139
>seq3602
Length=31274
Score = 93.3 bits (102), Expect = 9e-17
Identities = 68/79 (86%), Gaps = 0/79 (0%)
Strand=Plus/Minus
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|| ||| |||| || ||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 20298 GCATTTTGTGCAAGTTGGAACTTACCCGACAAGCAATTTCGCTACCTTAGGACCATTCTA 20239
Query 129 GTTACGGCCGCCGTTTACT 147
||||||| ||| ||| |||
Sbjct 20238 GTTACGGTCGCTGTTCACT 20220
>seq3500
Length=6668
Score = 86.0 bits (94), Expect = 1e-14
Identities = 72/87 (83%), Gaps = 1/87 (1%)
Strand=Plus/Plus
Query 187 CCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAG 246
|||| ||||||| |||| ||||| |||||||| | |||||| |||| |||||| ||
Sbjct 631 CCTTGACCTTCCGGCACTGGGCAAGCGTCAGCCACCATACATGGTCTA-CGACTTTGCGA 689
Query 247 AAACCTGTGTTTTTGGTAAACAGTCGC 273
| |||||||| ||||||||||||||||
Sbjct 690 AGACCTGTGTCTTTGGTAAACAGTCGC 716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1061972405248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |