Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01001291.1
Length=420
Score E
Sequences producing significant alignments: (Bits) Value
seq22748 223 9e-56
seq1391 165 2e-38
seq29345 150 4e-34
seq9254 127 5e-27
seq25396 122 2e-25
seq2270 120 8e-25
seq5914 114 3e-23
seq37211 105 2e-20
>seq22748
Length=18834
Score = 223 bits (246), Expect = 9e-56
Identities = 308/414 (74%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| |
Sbjct 14309 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 14365
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 14366 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 14421
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||| | |||||||||||| ||||||| |||| | ||| |||| |
Sbjct 14422 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 14479
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 14480 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCTG-GT 14537
Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306
||||||||||||| | || |||||||||| | ||||||||||||||| | |||||
Sbjct 14538 CTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 14596
Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366
||||||| || |||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct 14597 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 14656
Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|| | | |||||| | ||||| || || | ||||| || | |||||||
Sbjct 14657 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 14710
Score = 223 bits (246), Expect = 9e-56
Identities = 308/414 (74%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| |
Sbjct 16774 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 16830
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | ||
Sbjct 16831 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 16886
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||| | |||||||||||| ||||||| |||| | ||| |||| |
Sbjct 16887 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 16944
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
||||||| || |||||| | | |||| | ||| ||| |||| |||| | ||
Sbjct 16945 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCTG-GT 17002
Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306
||||||||||||| | || |||||||||| | ||||||||||||||| | |||||
Sbjct 17003 CTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 17061
Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366
||||||| || |||||||||||||||| |||||||||||||| ||| ||||||||||||
Sbjct 17062 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 17121
Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|| | | |||||| | ||||| || || | ||||| || | |||||||
Sbjct 17122 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 17175
>seq1391
Length=23006
Score = 165 bits (182), Expect = 2e-38
Identities = 295/414 (71%), Gaps = 14/414 (3%)
Strand=Plus/Plus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| ||||| ||| | || |||||| |||| |||| |||||| ||||| |
Sbjct 5968 CCACAACTCATTT-GCTGA-TTCTTCAACATCAGTCAGTTCAAACCTCCACTTAGTT-TC 6024
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
|||||| ||| || ||| |||| ||||||||| ||| ||| ||||| || |
Sbjct 6025 ACCCAAGCTT-CATCCTCGCCAT-GGATAGATCACCCATGTTT-GGGTCCATAAGTAAT- 6080
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||| | |||||||||||| ||||||| |||| | ||| |||| |
Sbjct 6081 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 6138
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246
||||||| || ||||||| | |||| | ||| | | |||| ||| | ||
Sbjct 6139 -GCCACTGCCTATGAGTCGCTAGCTCATTCTTCAACAAGCACGCGATCAGAGTCCTG-GT 6196
Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306
|||||||| |||| | || |||||||||| | ||||||||||||||| | |||||
Sbjct 6197 CTCCTCCCACTACTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 6255
Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366
||||||| || |||||||||||||||| |||||||| |||| || ||||||||||||
Sbjct 6256 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATTAGTCACCCAAGAGTATTTAGCCT 6315
Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
|| | | |||||| | ||||| || | || | ||||| || | ||||||
Sbjct 6316 TGCAAGGTGGTCCTTGCGGATTCACACGAGATTCCACGTGCCCCATGTTACTCG 6369
>seq29345
Length=84932
Score = 150 bits (166), Expect = 4e-34
Identities = 270/382 (71%), Gaps = 17/382 (4%)
Strand=Plus/Minus
Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100
||| ||||||| |||||| |||| | |||||| ||| || ||| ||| |||
Sbjct 8979 AGTTGGTTCGGACCTCCACCTAGTT-TCACCCAAGCTT-CATTCTGATCAT------GAT 8928
Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160
| ||| | || |||||| || | || ||| | || | | |||||||||||| |||
Sbjct 8927 CACCCAGGTT-CGGGTCCATAAGC-AGTGACAATT-GCTCCATGAAGACTCGCTTT-CGC 8872
Query 161 TACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATA 218
|||| || | | ||| |||| | ||||||| || |||||||| | |||| |
Sbjct 8871 TACGGCTGCAGTGGGTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCTGGCTCATTCTT 8813
Query 219 CAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCA 278
||| ||| |||| |||| | | || ||||||||||||| | || ||||||||||
Sbjct 8812 CAACAGGCACGCGGTCAGA-ATCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCA 8754
Query 279 GGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCA 338
| ||||||||| ||||| | | |||||||||| || ||||||||| |||||| ||||
Sbjct 8753 TGTTCTATTTCATTCCCCAATG-GAGGTTCTTTTCACCCTTCCCTCACAGTACTACTTCA 8695
Query 339 CTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGT 398
||||| |||| || |||||||||||| | | | |||||| ||||| || |
Sbjct 8694 CTATCAGTCACCCAAGAGTATTTAGCCTCGCAAGGTGGTCCTTGTTGATTCACACGGGAT 8635
Query 399 TTCTCGTGCTCCGTCCTACTCG 420
| | ||||| || | |||||||
Sbjct 8634 TCCACGTGCCCCATGCTACTCG 8613
>seq9254
Length=9297
Score = 127 bits (140), Expect = 5e-27
Identities = 130/169 (77%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309
|| ||||| |||| | || |||||||||| | ||||||||||||| | | ||| |||
Sbjct 1810 CTTCCACTACTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCTCGAT--GGGTGTCT 1867
Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369
|||| || |||||||| ||||||| |||| ||||||||| ||| ||||||||||||||
Sbjct 1868 TTTCACCCTTCCCTCATGGTACTATTTCATTATCGGTCACCCAGGAGTATTTAGCCTTGC 1927
Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418
| | |||||| | ||||| || | || | ||||| || | |||||
Sbjct 1928 AAGGTGGTCCTTGCTGATTCACACGGAATTCCACGTGCCCCATGCTACT 1976
>seq25396
Length=25890
Score = 122 bits (134), Expect = 2e-25
Identities = 111/139 (80%), Gaps = 1/139 (1%)
Strand=Plus/Plus
Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341
||||||||||||||| | |||||||||||| || |||||||||||||||| |||||||
Sbjct 24432 TCTATTTCACTCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTA 24490
Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTC 401
||||||| ||| |||||||||||||| | | |||||| | ||||| || || |
Sbjct 24491 TCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCC 24550
Query 402 TCGTGCTCCGTCCTACTCG 420
||||| || | |||||||
Sbjct 24551 ACGTGCCCCATGCTACTCG 24569
>seq2270
Length=29089
Score = 120 bits (132), Expect = 8e-25
Identities = 248/353 (70%), Gaps = 16/353 (5%)
Strand=Plus/Plus
Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88
|| ||||| | | | ||||| | |||||| ||||| | |||||| ||| | |||
Sbjct 22983 TTCTTCAATGTCAATTGGTTCAGACCTCCACTTAGTT-TCACCCAAGGTTT-ATCCTAGT 23040
Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148
||| | ||||||| || | ||| ||||| || | | ||| | |||| | ||||
Sbjct 23041 CATTG-ATAGATCACCTAGGTTT-GGGTCCATAAGCAAT-GACAATT-GCCCCATGAAGA 23096
Query 149 CTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206
||| ||||| | | | |||| | |||| |||| || |||||| || |||||
Sbjct 23097 CTCACTTTT-GTAATGGCTCCGATGGATTCCCTTAA-CTAAGCCACTACCTATGAGTCGT 23154
Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266
|| | |||| | ||| | | | | ||||| | || ||||||||||||| | |
Sbjct 23155 TGGCTCATTCTTCAACAAGCATGTAGTCAGAGT-CTTAGCCTCCTCCCACTGCTTGGAAG 23213
Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326
| ||||||||| | |||||||||||||| | | |||||||||||| ||||||||| |
Sbjct 23214 CTAACGGTTTCATGTTCTATTTCACTCCCATAT-AGGGGTTCTTTTCACCTTTCCCTGAT 23272
Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379
||||| ||||||||||| | ||| |||||||||||||| | | ||||||
Sbjct 23273 GGTAC---ATCACTATCGGT-ACCCAGAAGTATTTAGCCTTGCAAGTTGGTCC 23321
>seq5914
Length=11454
Score = 114 bits (126), Expect = 3e-23
Identities = 284/416 (68%), Gaps = 24/416 (6%)
Strand=Plus/Minus
Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68
||||| |||| | ||| | || |||||| |||| ||| || |||||| ||||| |
Sbjct 1031 CCACAACTCAT-CTGCTGA-TTCTTCAACATCAGTCAGTTTGGACCTCCACTTAGTT-TC 975
Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128
||| || || || ||| ||||| ||||||| ||| || |||||| || | ||
Sbjct 974 ACCTAAGGTT-CATCCTAGTCATAG-ATAGATCACCCAAGTT-CGGGTCCATAAGC-AGT 919
Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186
||| | |||| | |||||||||||| | |||| || | | ||| |||| |
Sbjct 918 GACAATT-GCCCCATGAAGACTCGCTTT-CATTACGGCTTCGGTGGGTTCCCTTAACCAA 861
Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA--CAAA 244
|||||| || |||||| | |||| | ||| | | ||| |||| || | |
Sbjct 860 -GCCACTACCTATGAGTCGCCAGCTCATTCTTCAACAAGCACGTTGTCA---AAGTCCTA 805
Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304
|| ||||||||||||| | | |||||||||| | |||||||||||| |||
Sbjct 804 GTCTCCTCCCACTGCTTGGAAGGTTACGGTTTCATGTTCTATTTCACTCG-------GGG 752
Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364
||||||||| || || ||||||||||||| || | |||| |||| | | ||||||||||
Sbjct 751 GTTCTTTTCACCCTTTCCTCACGGTACTACTTTATTATCAGTCACCCGGGAGTATTTAGC 692
Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420
||| | | || ||| | ||||| | || | ||||| || | |||||||
Sbjct 691 CTTACAAGGTGATCCTTGCTGATTCACATGGGATTCCACGTGCCCCATGCTACTCG 636
>seq37211
Length=99214
Score = 105 bits (116), Expect = 2e-20
Identities = 227/324 (70%), Gaps = 19/324 (6%)
Strand=Plus/Plus
Query 33 TCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATA 92
||||| |||||||| || |||| | ||| | |||||| ||| || | || |||
Sbjct 74165 TCAACATCAGTCGGTTTGGACCTCTACTTAATTCC-ACCCAAGCTT-CATCTTGGTCAT- 74221
Query 93 GGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCG 152
||||||||| || | || ||||||||| | || ||| | |||| | ||||||||
Sbjct 74222 GGATAGATCACCTAGGTT-CGGGTCTATAAGC-AGTGACAATT-GCCCCATGAAGACTCG 74278
Query 153 CTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGAC 210
||||| |||||| || | | ||| |||| | |||||| || |||||| | |
Sbjct 74279 CTTTT-GCTACGGCTACGGTGGGTTCCCTTAACCAA-GCCACTACCTATGAGTCGCCGGC 74336
Query 211 CCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATA 270
|||| | ||| ||| | ||||||| | || ||||||||||||| | || ||
Sbjct 74337 TCATTCTTCAACAGGCATGCAGTCAGAGT-CTTGGTCTCCTCCCACTGCTTGGAAGC-TA 74394
Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330
| |||||| ||||||| |||| || | |||||||||||| || ||||||||| |||
Sbjct 74395 CAGTTTCATATTCTATTTTACTCTCCGATG-GGGGTTCTTTTCACCCTTCCCTCACAGTA 74453
Query 331 CTAG------TTCACTATCGGTCA 348
|||| || |||||||||||
Sbjct 74454 CTAGTACTACTTTACTATCGGTCA 74477
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1241100280832
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