Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq22748 223 9e-56 seq1391 165 2e-38 seq29345 150 4e-34 seq9254 127 5e-27 seq25396 122 2e-25 seq2270 120 8e-25 seq5914 114 3e-23 seq37211 105 2e-20 >seq22748 Length=18834 Score = 223 bits (246), Expect = 9e-56 Identities = 308/414 (74%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 14309 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 14365 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 14366 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 14421 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||| | |||||||||||| ||||||| |||| | ||| |||| | Sbjct 14422 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 14479 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 14480 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCTG-GT 14537 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| | || |||||||||| | ||||||||||||||| | ||||| Sbjct 14538 CTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 14596 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 14597 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 14656 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 14657 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 14710 Score = 223 bits (246), Expect = 9e-56 Identities = 308/414 (74%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | || |||||| ||||||||||| |||||| ||||| | Sbjct 16774 CCACAACTCAT-CCGCTGA-TTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGTT-TC 16830 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || |||| ||| ||||||||| ||| | || |||||| || | || Sbjct 16831 ACCCAAGCTT-CATCCTGGTCAT-GGATAGATCACCCAGGTT-CGGGTCCATAAGC-AGT 16886 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||| | |||||||||||| ||||||| |||| | ||| |||| | Sbjct 16887 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 16944 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || |||||| | | |||| | ||| ||| |||| |||| | || Sbjct 16945 -GCCACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGTCCTG-GT 17002 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||||||||| | || |||||||||| | ||||||||||||||| | ||||| Sbjct 17003 CTCCTCCCACTGCTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 17061 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| |||||||||||||| ||| |||||||||||| Sbjct 17062 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATCGGTCACCCAGGAGTATTTAGCCT 17121 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || || | ||||| || | ||||||| Sbjct 17122 TGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCACGTGCCCCATGCTACTCG 17175 >seq1391 Length=23006 Score = 165 bits (182), Expect = 2e-38 Identities = 295/414 (71%), Gaps = 14/414 (3%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||| | || |||||| |||| |||| |||||| ||||| | Sbjct 5968 CCACAACTCATTT-GCTGA-TTCTTCAACATCAGTCAGTTCAAACCTCCACTTAGTT-TC 6024 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| ||| || ||| |||| ||||||||| ||| ||| ||||| || | Sbjct 6025 ACCCAAGCTT-CATCCTCGCCAT-GGATAGATCACCCATGTTT-GGGTCCATAAGTAAT- 6080 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||| | |||||||||||| ||||||| |||| | ||| |||| | Sbjct 6081 GACAATT-GCCCCATGAAGACTCGCTTT-CGCTACGGCTCCGGTGGGTTCCCTTAACCAA 6138 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| || ||||||| | |||| | ||| | | |||| ||| | || Sbjct 6139 -GCCACTGCCTATGAGTCGCTAGCTCATTCTTCAACAAGCACGCGATCAGAGTCCTG-GT 6196 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 |||||||| |||| | || |||||||||| | ||||||||||||||| | ||||| Sbjct 6197 CTCCTCCCACTACTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCCCGATG-GGGGT 6255 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 ||||||| || |||||||||||||||| |||||||| |||| || |||||||||||| Sbjct 6256 TCTTTTCACCCTTCCCTCACGGTACTACTTCACTATTAGTCACCCAAGAGTATTTAGCCT 6315 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 || | | |||||| | ||||| || | || | ||||| || | |||||| Sbjct 6316 TGCAAGGTGGTCCTTGCGGATTCACACGAGATTCCACGTGCCCCATGTTACTCG 6369 >seq29345 Length=84932 Score = 150 bits (166), Expect = 4e-34 Identities = 270/382 (71%), Gaps = 17/382 (4%) Strand=Plus/Minus Query 41 AGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGAT 100 ||| ||||||| |||||| |||| | |||||| ||| || ||| ||| ||| Sbjct 8979 AGTTGGTTCGGACCTCCACCTAGTT-TCACCCAAGCTT-CATTCTGATCAT------GAT 8928 Query 101 CGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGC 160 | ||| | || |||||| || | || ||| | || | | |||||||||||| ||| Sbjct 8927 CACCCAGGTT-CGGGTCCATAAGC-AGTGACAATT-GCTCCATGAAGACTCGCTTT-CGC 8872 Query 161 TACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGACCCATTATA 218 |||| || | | ||| |||| | ||||||| || |||||||| | |||| | Sbjct 8871 TACGGCTGCAGTGGGTTCCCTTAACCAA-GCCACTGCCTATGAGTCGCTGGCTCATTCTT 8813 Query 219 CAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCA 278 ||| ||| |||| |||| | | || ||||||||||||| | || |||||||||| Sbjct 8812 CAACAGGCACGCGGTCAGA-ATCCTGGTCTCCTCCCACTGCTTGGAAGCTTACGGTTTCA 8754 Query 279 GGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCA 338 | ||||||||| ||||| | | |||||||||| || ||||||||| |||||| |||| Sbjct 8753 TGTTCTATTTCATTCCCCAATG-GAGGTTCTTTTCACCCTTCCCTCACAGTACTACTTCA 8695 Query 339 CTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGT 398 ||||| |||| || |||||||||||| | | | |||||| ||||| || | Sbjct 8694 CTATCAGTCACCCAAGAGTATTTAGCCTCGCAAGGTGGTCCTTGTTGATTCACACGGGAT 8635 Query 399 TTCTCGTGCTCCGTCCTACTCG 420 | | ||||| || | ||||||| Sbjct 8634 TCCACGTGCCCCATGCTACTCG 8613 >seq9254 Length=9297 Score = 127 bits (140), Expect = 5e-27 Identities = 130/169 (77%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 250 CTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCT 309 || ||||| |||| | || |||||||||| | ||||||||||||| | | ||| ||| Sbjct 1810 CTTCCACTACTTGGAAGCTTACGGTTTCATGTTCTATTTCACTCCTCGAT--GGGTGTCT 1867 Query 310 TTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGG 369 |||| || |||||||| ||||||| |||| ||||||||| ||| |||||||||||||| Sbjct 1868 TTTCACCCTTCCCTCATGGTACTATTTCATTATCGGTCACCCAGGAGTATTTAGCCTTGC 1927 Query 370 AGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACT 418 | | |||||| | ||||| || | || | ||||| || | ||||| Sbjct 1928 AAGGTGGTCCTTGCTGATTCACACGGAATTCCACGTGCCCCATGCTACT 1976 >seq25396 Length=25890 Score = 122 bits (134), Expect = 2e-25 Identities = 111/139 (80%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 282 TCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTA 341 ||||||||||||||| | |||||||||||| || |||||||||||||||| ||||||| Sbjct 24432 TCTATTTCACTCCCCGATG-GGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCACTA 24490 Query 342 TCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTC 401 ||||||| ||| |||||||||||||| | | |||||| | ||||| || || | Sbjct 24491 TCGGTCACCCAGGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCC 24550 Query 402 TCGTGCTCCGTCCTACTCG 420 ||||| || | ||||||| Sbjct 24551 ACGTGCCCCATGCTACTCG 24569 >seq2270 Length=29089 Score = 120 bits (132), Expect = 8e-25 Identities = 248/353 (70%), Gaps = 16/353 (5%) Strand=Plus/Plus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 || ||||| | | | ||||| | |||||| ||||| | |||||| ||| | ||| Sbjct 22983 TTCTTCAATGTCAATTGGTTCAGACCTCCACTTAGTT-TCACCCAAGGTTT-ATCCTAGT 23040 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGA 148 ||| | ||||||| || | ||| ||||| || | | ||| | |||| | |||| Sbjct 23041 CATTG-ATAGATCACCTAGGTTT-GGGTCCATAAGCAAT-GACAATT-GCCCCATGAAGA 23096 Query 149 CTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGC 206 ||| ||||| | | | |||| | |||| |||| || |||||| || ||||| Sbjct 23097 CTCACTTTT-GTAATGGCTCCGATGGATTCCCTTAA-CTAAGCCACTACCTATGAGTCGT 23154 Query 207 TGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACG 266 || | |||| | ||| | | | | ||||| | || ||||||||||||| | | Sbjct 23155 TGGCTCATTCTTCAACAAGCATGTAGTCAGAGT-CTTAGCCTCCTCCCACTGCTTGGAAG 23213 Query 267 CATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCAC 326 | ||||||||| | |||||||||||||| | | |||||||||||| ||||||||| | Sbjct 23214 CTAACGGTTTCATGTTCTATTTCACTCCCATAT-AGGGGTTCTTTTCACCTTTCCCTGAT 23272 Query 327 GGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCC 379 ||||| ||||||||||| | ||| |||||||||||||| | | |||||| Sbjct 23273 GGTAC---ATCACTATCGGT-ACCCAGAAGTATTTAGCCTTGCAAGTTGGTCC 23321 >seq5914 Length=11454 Score = 114 bits (126), Expect = 3e-23 Identities = 284/416 (68%), Gaps = 24/416 (6%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| | ||| | || |||||| |||| ||| || |||||| ||||| | Sbjct 1031 CCACAACTCAT-CTGCTGA-TTCTTCAACATCAGTCAGTTTGGACCTCCACTTAGTT-TC 975 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || || || ||| ||||| ||||||| ||| || |||||| || | || Sbjct 974 ACCTAAGGTT-CATCCTAGTCATAG-ATAGATCACCCAAGTT-CGGGTCCATAAGC-AGT 919 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTT 186 ||| | |||| | |||||||||||| | |||| || | | ||| |||| | Sbjct 918 GACAATT-GCCCCATGAAGACTCGCTTT-CATTACGGCTTCGGTGGGTTCCCTTAACCAA 861 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAA--CAAA 244 |||||| || |||||| | |||| | ||| | | ||| |||| || | | Sbjct 860 -GCCACTACCTATGAGTCGCCAGCTCATTCTTCAACAAGCACGTTGTCA---AAGTCCTA 805 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 || ||||||||||||| | | |||||||||| | |||||||||||| ||| Sbjct 804 GTCTCCTCCCACTGCTTGGAAGGTTACGGTTTCATGTTCTATTTCACTCG-------GGG 752 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| || || ||||||||||||| || | |||| |||| | | |||||||||| Sbjct 751 GTTCTTTTCACCCTTTCCTCACGGTACTACTTTATTATCAGTCACCCGGGAGTATTTAGC 692 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||| | | || ||| | ||||| | || | ||||| || | ||||||| Sbjct 691 CTTACAAGGTGATCCTTGCTGATTCACATGGGATTCCACGTGCCCCATGCTACTCG 636 >seq37211 Length=99214 Score = 105 bits (116), Expect = 2e-20 Identities = 227/324 (70%), Gaps = 19/324 (6%) Strand=Plus/Plus Query 33 TCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATA 92 ||||| |||||||| || |||| | ||| | |||||| ||| || | || ||| Sbjct 74165 TCAACATCAGTCGGTTTGGACCTCTACTTAATTCC-ACCCAAGCTT-CATCTTGGTCAT- 74221 Query 93 GGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCG 152 ||||||||| || | || ||||||||| | || ||| | |||| | |||||||| Sbjct 74222 GGATAGATCACCTAGGTT-CGGGTCTATAAGC-AGTGACAATT-GCCCCATGAAGACTCG 74278 Query 153 CTTTTCGCTACGCCTCCCCTA--TTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTGAC 210 ||||| |||||| || | | ||| |||| | |||||| || |||||| | | Sbjct 74279 CTTTT-GCTACGGCTACGGTGGGTTCCCTTAACCAA-GCCACTACCTATGAGTCGCCGGC 74336 Query 211 CCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCATA 270 |||| | ||| ||| | ||||||| | || ||||||||||||| | || || Sbjct 74337 TCATTCTTCAACAGGCATGCAGTCAGAGT-CTTGGTCTCCTCCCACTGCTTGGAAGC-TA 74394 Query 271 CGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTA 330 | |||||| ||||||| |||| || | |||||||||||| || ||||||||| ||| Sbjct 74395 CAGTTTCATATTCTATTTTACTCTCCGATG-GGGGTTCTTTTCACCCTTCCCTCACAGTA 74453 Query 331 CTAG------TTCACTATCGGTCA 348 |||| || ||||||||||| Sbjct 74454 CTAGTACTACTTTACTATCGGTCA 74477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241100280832