Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq28435 77.0 2e-12
seq9766 75.2 7e-12
seq21713 71.6 8e-11
>seq28435
Length=1661
Score = 77.0 bits (84), Expect = 2e-12
Identities = 60/69 (87%), Gaps = 2/69 (3%)
Strand=Plus/Minus
Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115
|| || |||| ||||||| | ||||||||||| |||||||||||||||||||||| | ||
Sbjct 1167 AGACAATTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CA 1110
Query 116 ACGCAAGCT 124
|||| ||||
Sbjct 1109 ACGCGAGCT 1101
>seq9766
Length=43015
Score = 75.2 bits (82), Expect = 7e-12
Identities = 56/63 (89%), Gaps = 2/63 (3%)
Strand=Plus/Minus
Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121
|||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| |
Sbjct 38438 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 38381
Query 122 GCT 124
|||
Sbjct 38380 GCT 38378
>seq21713
Length=4003
Score = 71.6 bits (78), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109
|||||| ||||| || ||||||| | ||||||||||| ||||||||||||||||||| |
Sbjct 1711 TCACTAGACCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACAT 1768
Query 110 AATACAACGCAAGCT 124
| | ||||| ||||
Sbjct 1769 AGT-CAACGAGAGCT 1782
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300686500640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |