Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq28435 77.0 2e-12 seq9766 75.2 7e-12 seq21713 71.6 8e-11 >seq28435 Length=1661 Score = 77.0 bits (84), Expect = 2e-12 Identities = 60/69 (87%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 56 AGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACA 115 || || |||| ||||||| | ||||||||||| |||||||||||||||||||||| | || Sbjct 1167 AGACAATTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CA 1110 Query 116 ACGCAAGCT 124 |||| |||| Sbjct 1109 ACGCGAGCT 1101 >seq9766 Length=43015 Score = 75.2 bits (82), Expect = 7e-12 Identities = 56/63 (89%), Gaps = 2/63 (3%) Strand=Plus/Minus Query 62 TTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAA 121 |||| ||||||| | ||||||||||| |||||||||||||||||||||| | |||||| | Sbjct 38438 TTCAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGT-CAACGCGA 38381 Query 122 GCT 124 ||| Sbjct 38380 GCT 38378 >seq21713 Length=4003 Score = 71.6 bits (78), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand=Plus/Plus Query 50 TCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGT 109 |||||| ||||| || ||||||| | ||||||||||| ||||||||||||||||||| | Sbjct 1711 TCACTAGACCATT-CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACAT 1768 Query 110 AATACAACGCAAGCT 124 | | ||||| |||| Sbjct 1769 AGT-CAACGAGAGCT 1782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300686500640