Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq15005 145 1e-32
>seq15005
Length=3975
Score = 145 bits (160), Expect = 1e-32
Identities = 205/286 (72%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||| |||||||| || ||||||| || |||| | | |||||||| ||| ||
Sbjct 506 CCCATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGT 565
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||| |||| |||| || |||||||| ||||||||| |||||| | ||||| |||
Sbjct 566 TCCTTCGTAGATCTCCGGATTTCACCCCTACACACGAAATTCCACTCTCCTCTGTCTCAC 625
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGA-GCCCATAGTTTTCACATCTGAC 179
||||| || ||||| | ||| | | ||| | | | |||||| | ||
Sbjct 626 TCAAGTGAATGGGTTTCGAGAGCATTCCACCAGTTTTTGGCGAC---TTTCACTTTCAAC 682
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
| | |||||||| ||||||||| |||| | | |||| | ||| |||||| || |
Sbjct 683 CCGATTCACCGCCTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCC 742
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTC 285
|| |||||||||||||||||||| ||||||||| ||||| ||||||
Sbjct 743 GTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTC 788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828476848808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |