Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq23324 255 9e-66 seq22748 255 9e-66 seq12566 244 2e-62 seq292 199 6e-49 seq27037 197 2e-48 seq27247 192 9e-47 seq14494 190 3e-46 seq24222 145 1e-32 seq4672 122 1e-25 seq6898 91.5 2e-16 seq7544 73.4 6e-11 >seq23324 Length=67678 Score = 255 bits (282), Expect = 9e-66 Identities = 221/273 (81%), Gaps = 1/273 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| || |||| ||| |||||| Sbjct 316 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCGCCGCACTTGGCTACCCAGCG 257 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 256 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 197 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| |||||||||| |||| || Sbjct 196 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTATCTCACG 137 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 136 GCGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 77 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 76 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 44 >seq22748 Length=18834 Score = 255 bits (282), Expect = 9e-66 Identities = 221/273 (81%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| || |||| ||| |||||| Sbjct 12201 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCGCCGCACTTGGCTACCCAGCG 12260 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| |||| |||||||||||||||||| Sbjct 12261 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 12320 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || |||||||| |||||| |||||||||| |||| || Sbjct 12321 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTATCTCACG 12380 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || | Sbjct 12381 GCGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 12440 Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| |||||||||| | || |||||||||||| Sbjct 12441 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 12473 >seq12566 Length=39011 Score = 244 bits (270), Expect = 2e-62 Identities = 209/257 (81%), Gaps = 1/257 (0%) Strand=Plus/Plus Query 20 AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGTA 78 |||||| |||||| ||||| ||| |||| ||| |||||| | | || | | || | Sbjct 31346 AGATGCTTTCAGCAATTATCTGCTCCGCACTTGGCTACCCAGCGTTTACAGTGGACACGA 31405 Query 79 CAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTC 138 ||||||| |||||||||| |||| ||||||||||||||||||| ||| || ||||||| Sbjct 31406 TAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTC 31465 Query 139 AAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGC 198 || || |||||||| ||||| ||||||||||||||| || |||||||||||||| Sbjct 31466 AATGCTCTAACGCCCACACTGGATATGGACCGAACTGTCTCATGATGTTCTGAACCCAGC 31525 Query 199 TCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGAT 258 || ||| || ||||||||||||||||||||||||||||| || |||| |||||||||| Sbjct 31526 TCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTG 31585 Query 259 GAGACGAGCCGACATCG 275 | || |||||||||||| Sbjct 31586 GCGAAGAGCCGACATCG 31602 >seq292 Length=4124 Score = 199 bits (220), Expect = 6e-49 Identities = 196/252 (78%), Gaps = 1/252 (0%) Strand=Plus/Minus Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62 || |||||| ||||||||| |||||| |||||| ||| |||| ||| || ||| Sbjct 2895 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCTAGCG 2836 Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | | | | |||| | ||||||| |||||||||| ||| ||| |||||||||||||| Sbjct 2835 TTTACCATGGGCACGATAACTGGTACACCAGAGGTGCATCCTTCCTGGTCCTCTCGTACT 2776 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182 | ||| || ||||||||| || | ||||| |||||| |||||||| |||||| || Sbjct 2775 AGGGAAAGGTCCTCTCAATGCTCTAATACCCACACCGGATATGGACCGAATTGTCTCACG 2716 Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242 ||||||| |||| || || ||| || ||||||||| |||||| |||||||||||| || | Sbjct 2715 ACGTTCTAAACCGAGATCACGTACCGCTTTAATGGACGAACAACCCAACCCTTGGAACAT 2656 Query 243 ACTTCAGCCCCA 254 ||| |||||||| Sbjct 2655 ACTACAGCCCCA 2644 >seq27037 Length=48240 Score = 197 bits (218), Expect = 2e-48 Identities = 148/174 (85%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 100 GTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACG 159 |||| ||| ||||||||| ||||||||| || ||||||||| || | |||||| | Sbjct 31984 GTCCTTCCTGGTCCTCTCATACTAAGGAAAGGTCCTCTCAATGCTCTAATGCCCACACTG 31925 Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219 |||| ||||||||||||||| |||||||||||||||||||| ||| || ||||||||||| Sbjct 31924 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGC 31865 Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273 |||||||||||||||||| || |||| |||||||||| | || |||||||||| Sbjct 31864 GAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACAT 31811 >seq27247 Length=17038 Score = 192 bits (212), Expect = 9e-47 Identities = 165/204 (81%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131 |||| | |||| || |||||||||| | | ||| ||||||||||||||| ||| || Sbjct 8269 GGCATGATAACTAGTACACCAGAGGTGCATACTTCCTGGTCCTCTCGTACTAGGGAAAGG 8210 Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191 ||||||||| || | |||||| |||||| ||||||||||||||| ||||||||||| Sbjct 8209 TCCTCTCAATGCTCTAATGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGA 8150 Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251 ||||| | | || || |||||||||||||||| |||||| ||||| || |||| ||||| Sbjct 8149 ACCCAACCCATGTACCGCTTTAATGGGCGAACAACCCAACTCTTGGAACATACTACAGCC 8090 Query 252 CCAGGATGAGACGAGCCGACATCG 275 ||||| | || |||||||||||| Sbjct 8089 CCAGGTGGCGAAGAGCCGACATCG 8066 >seq14494 Length=10696 Score = 190 bits (210), Expect = 3e-46 Identities = 180/227 (79%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 50 TTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCC 108 || ||| |||||| | | | | |||| | ||||||| ||||| |||| | || ||| Sbjct 2965 TTGGCTACCCAGCGTTTACCATGGGCACGATAACTGGTACACCAAAGGTGCGACCTTCCT 3024 Query 109 GGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGAC 168 |||||| |||||| ||| || |||||| || || |||||||| |||||| |||| Sbjct 3025 AATCCTCTAGTACTAGGGAAAGGTCCTCTTAATGCTCTAACGCCCACACCGGATATGGAC 3084 Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228 ||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| Sbjct 3085 CGAACTGTCTCACGACGTTCTGAACCCAGCTC-AGTACCGCTTTAATGGGCGAACAGCCC 3143 Query 229 AACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||||| || |||| |||||||| | | || ||| |||||||| Sbjct 3144 AACCCTTGGAACATACTACAGCCCCAAGTGGCGAAGAGTCGACATCG 3190 >seq24222 Length=6659 Score = 145 bits (160), Expect = 1e-32 Identities = 173/233 (74%), Gaps = 5/233 (2%) Strand=Plus/Plus Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 ||||||||| || ||| ||| || ||| ||||| ||| || || ||||| | ||| | Sbjct 3592 AACTTAGCTGCCTAGCGCTGCTATTAGCATAACAACAGGTACATCATAGGTTGGCCCAAC 3651 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162 | ||||||| |||||||| |||| || || | ||| || || | | ||| Sbjct 3652 CAAGTCCTCTTGTACTAAGATTGGCTCTTCACAGTTCTCCCTTTAACACCAATGGTAGAT 3711 Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222 ||| || |||||||||| ||||||| | |||||| ||| | | ||| ||| |||||| Sbjct 3712 AGGAACTGAACTGTCTCACGACGTT-TAAACCCAACTCCTATACTACTTGAATCGGCGAA 3770 Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || || |||||||||||||| ||||| |||||||||| || ||| |||||||| Sbjct 3771 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 3823 >seq4672 Length=4051 Score = 122 bits (134), Expect = 1e-25 Identities = 84/95 (88%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || Sbjct 3114 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 3173 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 || | |||||||||| | || |||||||||||| Sbjct 3174 ATATTACAGCCCCAGGTGGCGAAGAGCCGACATCG 3208 >seq6898 Length=13339 Score = 91.5 bits (100), Expect = 2e-16 Identities = 91/117 (78%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 48 ACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106 |||| ||| |||||| | | | | |||| | ||||||| |||||||||| |||| || Sbjct 4178 ACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTC 4237 Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATA 163 ||||||||||| ||||| ||| || ||||||||| || |||||||| |||||| Sbjct 4238 CCGGTCCTCTCATACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATA 4294 >seq7544 Length=26264 Score = 73.4 bits (80), Expect = 6e-11 Identities = 57/68 (84%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248 |||||| ||||| ||| || ||||| ||||||||||||||||||||||| || |||| || Sbjct 25027 TGAACCTAGCTCACGTACCGCTTTACTGGGCGAACAGCCCAACCCTTGGAACATACTACA 25086 Query 249 GCCCCAGG 256 | |||| Sbjct 25087 ACTGCAGG 25094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780495564128