Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq23324 255 9e-66
seq22748 255 9e-66
seq12566 244 2e-62
seq292 199 6e-49
seq27037 197 2e-48
seq27247 192 9e-47
seq14494 190 3e-46
seq24222 145 1e-32
seq4672 122 1e-25
seq6898 91.5 2e-16
seq7544 73.4 6e-11
>seq23324
Length=67678
Score = 255 bits (282), Expect = 9e-66
Identities = 221/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| || |||| ||| ||||||
Sbjct 316 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCGCCGCACTTGGCTACCCAGCG 257
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 256 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 197
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| |||||||||| |||| ||
Sbjct 196 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTATCTCACG 137
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || |
Sbjct 136 GCGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 77
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| |||||||||| | || ||||||||||||
Sbjct 76 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 44
>seq22748
Length=18834
Score = 255 bits (282), Expect = 9e-66
Identities = 221/273 (81%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| || |||| ||| ||||||
Sbjct 12201 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCGCCGCACTTGGCTACCCAGCG 12260
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| |||| ||||||||||||||||||
Sbjct 12261 TTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACT 12320
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || |||||||| |||||| |||||||||| |||| ||
Sbjct 12321 AGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTATCTCACG 12380
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
||||||||||||||||| ||| || ||||||||||||||||||||||||||||| || |
Sbjct 12381 GCGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACAT 12440
Query 243 ACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||| |||||||||| | || ||||||||||||
Sbjct 12441 ACTACAGCCCCAGGTGGCGAAGAGCCGACATCG 12473
>seq12566
Length=39011
Score = 244 bits (270), Expect = 2e-62
Identities = 209/257 (81%), Gaps = 1/257 (0%)
Strand=Plus/Plus
Query 20 AGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TATGCACTTGGCAGTA 78
|||||| |||||| ||||| ||| |||| ||| |||||| | | || | | || |
Sbjct 31346 AGATGCTTTCAGCAATTATCTGCTCCGCACTTGGCTACCCAGCGTTTACAGTGGACACGA 31405
Query 79 CAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTC 138
||||||| |||||||||| |||| ||||||||||||||||||| ||| || |||||||
Sbjct 31406 TAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCTCTC 31465
Query 139 AAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGC 198
|| || |||||||| ||||| ||||||||||||||| || ||||||||||||||
Sbjct 31466 AATGCTCTAACGCCCACACTGGATATGGACCGAACTGTCTCATGATGTTCTGAACCCAGC 31525
Query 199 TCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGAT 258
|| ||| || ||||||||||||||||||||||||||||| || |||| ||||||||||
Sbjct 31526 TCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTG 31585
Query 259 GAGACGAGCCGACATCG 275
| || ||||||||||||
Sbjct 31586 GCGAAGAGCCGACATCG 31602
>seq292
Length=4124
Score = 199 bits (220), Expect = 6e-49
Identities = 196/252 (78%), Gaps = 1/252 (0%)
Strand=Plus/Minus
Query 4 GGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC- 62
|| |||||| ||||||||| |||||| |||||| ||| |||| ||| || |||
Sbjct 2895 GGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCTAGCG 2836
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122
| | | | |||| | ||||||| |||||||||| ||| ||| ||||||||||||||
Sbjct 2835 TTTACCATGGGCACGATAACTGGTACACCAGAGGTGCATCCTTCCTGGTCCTCTCGTACT 2776
Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCG 182
| ||| || ||||||||| || | ||||| |||||| |||||||| |||||| ||
Sbjct 2775 AGGGAAAGGTCCTCTCAATGCTCTAATACCCACACCGGATATGGACCGAATTGTCTCACG 2716
Query 183 ACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCT 242
||||||| |||| || || ||| || ||||||||| |||||| |||||||||||| || |
Sbjct 2715 ACGTTCTAAACCGAGATCACGTACCGCTTTAATGGACGAACAACCCAACCCTTGGAACAT 2656
Query 243 ACTTCAGCCCCA 254
||| ||||||||
Sbjct 2655 ACTACAGCCCCA 2644
>seq27037
Length=48240
Score = 197 bits (218), Expect = 2e-48
Identities = 148/174 (85%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 100 GTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACG 159
|||| ||| ||||||||| ||||||||| || ||||||||| || | |||||| |
Sbjct 31984 GTCCTTCCTGGTCCTCTCATACTAAGGAAAGGTCCTCTCAATGCTCTAATGCCCACACTG 31925
Query 160 GATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGC 219
|||| ||||||||||||||| |||||||||||||||||||| ||| || |||||||||||
Sbjct 31924 GATATGGACCGAACTGTCTCACGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGC 31865
Query 220 GAACAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACAT 273
|||||||||||||||||| || |||| |||||||||| | || ||||||||||
Sbjct 31864 GAACAGCCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAGCCGACAT 31811
>seq27247
Length=17038
Score = 192 bits (212), Expect = 9e-47
Identities = 165/204 (81%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 72 GGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGC 131
|||| | |||| || |||||||||| | | ||| ||||||||||||||| ||| ||
Sbjct 8269 GGCATGATAACTAGTACACCAGAGGTGCATACTTCCTGGTCCTCTCGTACTAGGGAAAGG 8210
Query 132 TCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGA 191
||||||||| || | |||||| |||||| ||||||||||||||| |||||||||||
Sbjct 8209 TCCTCTCAATGCTCTAATGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTGA 8150
Query 192 ACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGCC 251
||||| | | || || |||||||||||||||| |||||| ||||| || |||| |||||
Sbjct 8149 ACCCAACCCATGTACCGCTTTAATGGGCGAACAACCCAACTCTTGGAACATACTACAGCC 8090
Query 252 CCAGGATGAGACGAGCCGACATCG 275
||||| | || ||||||||||||
Sbjct 8089 CCAGGTGGCGAAGAGCCGACATCG 8066
>seq14494
Length=10696
Score = 190 bits (210), Expect = 3e-46
Identities = 180/227 (79%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 50 TTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCC 108
|| ||| |||||| | | | | |||| | ||||||| ||||| |||| | || |||
Sbjct 2965 TTGGCTACCCAGCGTTTACCATGGGCACGATAACTGGTACACCAAAGGTGCGACCTTCCT 3024
Query 109 GGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGAC 168
|||||| |||||| ||| || |||||| || || |||||||| |||||| ||||
Sbjct 3025 AATCCTCTAGTACTAGGGAAAGGTCCTCTTAATGCTCTAACGCCCACACCGGATATGGAC 3084
Query 169 CGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCC 228
||||||||||| |||||||||||||||||||| || || ||||||||||||||||||||
Sbjct 3085 CGAACTGTCTCACGACGTTCTGAACCCAGCTC-AGTACCGCTTTAATGGGCGAACAGCCC 3143
Query 229 AACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
||||||||| || |||| |||||||| | | || ||| ||||||||
Sbjct 3144 AACCCTTGGAACATACTACAGCCCCAAGTGGCGAAGAGTCGACATCG 3190
>seq24222
Length=6659
Score = 145 bits (160), Expect = 1e-32
Identities = 173/233 (74%), Gaps = 5/233 (2%)
Strand=Plus/Plus
Query 47 AACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106
||||||||| || ||| ||| || ||| ||||| ||| || || ||||| | ||| |
Sbjct 3592 AACTTAGCTGCCTAGCGCTGCTATTAGCATAACAACAGGTACATCATAGGTTGGCCCAAC 3651
Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCT----ACGCCCACGACGGAT 162
| ||||||| |||||||| |||| || || | ||| || || | | |||
Sbjct 3652 CAAGTCCTCTTGTACTAAGATTGGCTCTTCACAGTTCTCCCTTTAACACCAATGGTAGAT 3711
Query 163 AGGGACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAA 222
||| || |||||||||| ||||||| | |||||| ||| | | ||| ||| ||||||
Sbjct 3712 AGGAACTGAACTGTCTCACGACGTT-TAAACCCAACTCCTATACTACTTGAATCGGCGAA 3770
Query 223 CAGCCCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| || |||||||||||||| ||||| |||||||||| || ||| ||||||||
Sbjct 3771 CAACCGAACCCTTGGGACCTTCTTCAACCCCAGGATGTGATGAGTCGACATCG 3823
>seq4672
Length=4051
Score = 122 bits (134), Expect = 1e-25
Identities = 84/95 (88%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240
|||||||||||||||||||| ||| || ||||||||||||||||||||||||||||| ||
Sbjct 3114 CGACGTTCTGAACCCAGCTCACGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGAAC 3173
Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|| | |||||||||| | || ||||||||||||
Sbjct 3174 ATATTACAGCCCCAGGTGGCGAAGAGCCGACATCG 3208
>seq6898
Length=13339
Score = 91.5 bits (100), Expect = 2e-16
Identities = 91/117 (78%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 48 ACTTAGCTTCCCAGC-TATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATC 106
|||| ||| |||||| | | | | |||| | ||||||| |||||||||| |||| ||
Sbjct 4178 ACTTGGCTACCCAGCGTTTACCGTGGGCACGATAACTGGTACACCAGAGGTGCGTCCTTC 4237
Query 107 CCGGTCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATA 163
||||||||||| ||||| ||| || ||||||||| || |||||||| ||||||
Sbjct 4238 CCGGTCCTCTCATACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATA 4294
>seq7544
Length=26264
Score = 73.4 bits (80), Expect = 6e-11
Identities = 57/68 (84%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 189 TGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCA 248
|||||| ||||| ||| || ||||| ||||||||||||||||||||||| || |||| ||
Sbjct 25027 TGAACCTAGCTCACGTACCGCTTTACTGGGCGAACAGCCCAACCCTTGGAACATACTACA 25086
Query 249 GCCCCAGG 256
| ||||
Sbjct 25087 ACTGCAGG 25094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 780495564128
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