Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq25396 129 1e-27 seq22748 129 1e-27 seq8783 129 1e-27 seq9254 89.7 9e-16 seq1391 84.2 4e-14 seq5913 80.6 5e-13 seq5911 73.4 7e-11 >seq25396 Length=25890 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 24928 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 24869 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| Sbjct 24868 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCAAA 24816 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 24815 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 24759 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 24758 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 24699 Query 249 CCT 251 ||| Sbjct 24698 CCT 24696 >seq22748 Length=18834 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 15069 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 15010 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| Sbjct 15009 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCAAA 14957 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 14956 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 14900 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 14899 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 14840 Query 249 CCT 251 ||| Sbjct 14839 CCT 14837 Score = 123 bits (136), Expect = 5e-26 Identities = 176/243 (72%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 17534 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 17475 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| Sbjct 17474 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCAAA 17422 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | | || || ||| ||||||||||||||||| ||| Sbjct 17421 C--TGC-TGCTGAATCCATGGGCAGGAAAGAGACAACCTGGCGAACTGAAACATCTTAGT 17365 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 17364 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 17305 Query 249 CCT 251 ||| Sbjct 17304 CCT 17302 >seq8783 Length=11423 Score = 129 bits (142), Expect = 1e-27 Identities = 177/243 (73%), Gaps = 11/243 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||| ||| ||| | || ||| ||||| ||||||| ||| | ||| |||| Sbjct 6468 GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGG 6409 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGT 129 |||| | ||| | | | |||||| ||||| |||||| || |||| ||| Sbjct 6408 GAGTT-GAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACC------TTTCAAA 6356 Query 130 CATTGCATGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGT 188 | ||| |||||||| ||| || | |||| || ||| ||||||||||||||||| ||| Sbjct 6355 C--TGC-TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGT 6299 Query 189 AGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAG 248 ||| ||||||||||| ||| | ||||||| ||||| |||||||||||||||| || Sbjct 6298 AGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGAGCAG 6239 Query 249 CCT 251 ||| Sbjct 6238 CCT 6236 >seq9254 Length=9297 Score = 89.7 bits (98), Expect = 9e-16 Identities = 86/109 (79%), Gaps = 1/109 (1%) Strand=Plus/Minus Query 137 TGCTGAATACATAGGTATGCAAA-GCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 || ||||| ||| | | ||||| | ||| |||||||||||||||| | ||||| | Sbjct 2215 TGTTGAATCCATGAGCAGGCAAATGACAACCTAGCGAACTGAAACATCTTAATAGCTAGA 2156 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 |||||||||| ||| | ||||||| ||||| |||||||||||||||| Sbjct 2155 GGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCGAAATGGGA 2107 >seq1391 Length=23006 Score = 84.2 bits (92), Expect = 4e-14 Identities = 153/218 (70%), Gaps = 12/218 (6%) Strand=Plus/Minus Query 35 GATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGATCCG 94 || ||||| |||||| ||| | ||| |||||||| | ||| | | | |||||| Sbjct 6702 GAAGAAGGGTGTAGTAAGCGACGAAATGCTTCGGGGAGTT-GAAAATAAGCGTAGATCCG 6644 Query 95 CAGATTTCCGAATGGGGAAACCCGGCCCTTTGGGTCATTGCATGCTGAATACATAGGTAT 154 |||| |||||| || ||||| ||| | ||| |||| ||| ||| || | Sbjct 6643 GAGATC-CCGAATAGGTAAACC------TTTCAAAC--TGC-TGCTAAATCCATGGGCAG 6594 Query 155 GCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGA 213 |||| || ||| ||||||||||||||||| | ||||| ||||||||||| ||| | Sbjct 6593 GCAAGAGACAACTTGGCGAACTGAAACATCTTACTAGCTAGAGGAAAAGAAAGCAAAAGC 6534 Query 214 GATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCT 251 ||| ||| |||| ||||| |||||||| ||||| Sbjct 6533 AATTTCCATTGTAGCAACGAGCAAAATGGGAGCAGCCT 6496 >seq5913 Length=4307 Score = 80.6 bits (88), Expect = 5e-13 Identities = 84/109 (77%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 137 TGCTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCA 195 |||| ||| ||| || | ||| || ||| |||||||||||||||| |||| || | Sbjct 2637 TGCTAAATCCATGGGCAGACAAGAGGCAACCTAGCGAACTGAAACATCTTAGTATCTAGA 2696 Query 196 GGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 |||||||||| ||| | |||||| ||||| ||||||||||||||| Sbjct 2697 GGAAAAGAAAGCAAAAGTGATTCCTGTAGTAGCAGCGAGCGAAATGGGA 2745 >seq5911 Length=1766 Score = 73.4 bits (80), Expect = 7e-11 Identities = 61/75 (81%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 177 AAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCG 236 |||||||| ||||||| | ||||||||| ||| | |||||| |||||||||||||| Sbjct 648 AAACATCTTAGTAGCTAGAAGAAAAGAAAGCAAAAGCGATTCCTGTAGTAGTGGCGAGCG 707 Query 237 AAATGGGATGAGCCT 251 ||||| || ||||| Sbjct 708 AAATGCGAGCAGCCT 722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918030362368