Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13] 40,248 sequences; 321,046,825 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq9766 711 0.0 seq9767 650 0.0 seq21712 641 0.0 seq33114 542 9e-152 seq5631 336 7e-90 seq24227 159 1e-36 seq25557 134 5e-29 seq32639 98.7 3e-18 >seq9766 Length=43015 Score = 711 bits (788), Expect = 0.0 Identities = 481/533 (90%), Gaps = 7/533 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 41904 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATC 41845 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 41844 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATC 41785 Query 127 GGCCCGC-GAAGGA--CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 ||||||| |||| | ||||| ||| ||| | || | ||| || ||||| |||| Sbjct 41784 GGCCCGCCGAAGCAAGCCTTATGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGTTTCA 41727 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 || ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||| Sbjct 41726 CGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCA 41668 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41667 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 41608 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 41607 CTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTA 41548 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 41547 GACAGGGACAGTGGGAATCTCGTTAATCCATCCATGCGCGTCACTAATTAGATGACGAGG 41488 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 41487 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 41428 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 41427 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 41375 >seq9767 Length=3674 Score = 650 bits (720), Expect = 0.0 Identities = 469/534 (88%), Gaps = 8/534 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTT-CTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||||| || ||| ||||||| |||||||| |||| | ||||||||||||| ||||| Sbjct 1610 CTTTTGTTCCACACGAGATTTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGTGTTAT 1551 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 |||| |||||||||||||||||||||||||| ||||||||||||| || |||| || Sbjct 1550 CCTTTAGCAGATGTGCCGCCCCAGCCAAACTCCTCACCTGACAATGTTTTCCGCCCGAAT 1491 Query 126 CGGCCCGC-GAAGGA--CCTTAACGCCAGAAAATGGTCGGTGAAGACCAG-TTCCGCTTC 181 |||||||| |||| | ||||| ||| ||| || ||| | || | ||||| ||| Sbjct 1490 CGGCCCGCTGAAGCAAGCCTTATGTCCAAAAAGAGG--GGTAGTGCCCCGCTTCCGTTTC 1433 Query 182 ATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCC 241 | || ||||||||| |||| ||| ||||||||||||||||| |||| |||||||| Sbjct 1432 ACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCC 1374 Query 242 ACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 301 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1373 ACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGG 1314 Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 ||||||||||| |||||||| ||||||||||||| |||||||||||||||||| |||||| Sbjct 1313 TCTTCTTTCCCTGCTGATTCTGCCAAGCCCGTTCTCTTGGCTGTGGTTTCGCTGGATAGT 1254 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 421 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1253 AGATAGGAACAGTGGGAGTCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAG 1194 Query 422 GCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA 481 |||||||||||||||| ||||||||||||||||| | ||||||||||| |||||||||| Sbjct 1193 ACATTTGGCTACCTTAAAAGAGTCATAGTTACTCCTGTCGTTTACCCGCACTTGGTTGAA 1134 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 1133 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATC 1080 >seq21712 Length=1195 Score = 641 bits (710), Expect = 0.0 Identities = 459/523 (88%), Gaps = 19/523 (4%) Strand=Plus/Plus Query 23 GATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGT------TATGGTTTAACAGA 76 ||||||||||||| |||| | |||||||||||||||| ||| |||||| Sbjct 256 GATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTGTACGTTATCTTTTAAC--- 312 Query 77 TGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCG-CGA 135 || ||||||||||||||||||||||||||||||| || ||||||||||||||| ||| Sbjct 313 ---GCTGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCCGGATCGGCCCGTCGA 369 Query 136 AGGA--CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192 || | ||||| ||| ||| | || | ||| || || || |||| || ||||| Sbjct 370 AGCAAGCCTTATGTCCAAAAAGAGGGACAGTGCC--CCGCTTTCGTTTCACGGAATAAGT 427 Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTAC 252 |||| |||| ||| ||||||||||||||||| |||| |||||||||||||| |||| Sbjct 428 AAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCACTTATCCTAC 486 Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 487 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 546 Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372 ||||||||| |||||||||||||||||||||| ||||||||| ||||||||| ||||||| Sbjct 547 CGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGGGGTTTCGCTGGATAGTAGACAGGGACA 606 Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 607 GTGGGAATCTCGTTATTCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 666 Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 667 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 726 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||| ||||||||||| | |||| Sbjct 727 TGACATTCAGAGCACTGGGCAGAACTCACATTGCGTTAGCATC 769 >seq33114 Length=43009 Score = 542 bits (600), Expect = 9e-152 Identities = 417/492 (85%), Gaps = 22/492 (4%) Strand=Plus/Plus Query 47 CTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106 |||||||||| || ||||| ||||||||||||| |||||||||||| |||||||||||| Sbjct 9437 CTTAGGACACTTGTGTTATCTTTTAACAGATGTGTCGCCCCAGCCAACCTCCCCACCTGA 9496 Query 107 CAATGTCATCAACCCGGATCGGCCCG-CGAAGGA--CCTTAACGCCAGAAAATGGTCGGT 163 |||||| | |||| ||| ||||| ||||| | |||| | | | || | || | || Sbjct 9497 AAATGTCTTTCGCCCGAATCAGCCCGTCGAAGCAGGCCTTGTC-CAAAAAGAAGGGCAGT 9555 Query 164 GAAGACCAGTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACT 223 | || ||||| |||| || ||||||||| |||| ||| |||||||||||||||| Sbjct 9556 GCC--CCGCTTCCGTTTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACT 9613 Query 224 TGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTA 283 | |||| ||||||||||| | ||||||||||||||||||||||||||||| ||||| Sbjct 9614 TTCGCCTTTT-GGCTCCCACTTTTCCTACACCTCTCAAGTCATTTCACAAAGTCAGACTA 9672 Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCT 343 ||||||||||||||| ||||||||||||| ||||||| |||||||| Sbjct 9673 GAGTCAAGCTCAACAAGGTCTTCTTTCCC---------------GCCCGTTTCCTTGGCT 9717 Query 344 GTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGT 403 |||||| |||| | ||| ||| ||||||| ||||||||| |||||||||||||||||||| Sbjct 9718 GTGGTTCCGCTGGCTAGAAGACAGGGACAATGGGAATCTTGTTAATCCATTCATGCGCGT 9777 Query 404 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9778 CACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 9837 Query 464 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 9838 TACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACAT 9897 Query 524 TGCGTCAACATC 535 ||||| | |||| Sbjct 9898 TGCGTTAGCATC 9909 >seq5631 Length=4661 Score = 336 bits (372), Expect = 7e-90 Identities = 276/330 (84%), Gaps = 7/330 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | |||||||||||| | |||| Sbjct 3550 CTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTACATTATC 3491 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||| |||| |||||||||||| ||||||||| ||| || |||||||| Sbjct 3490 TTTTAACAGATGTGCTGCCCAAGCCAAACTCCCAACCTGACAACGTCTTCCGCCCGGATC 3431 Query 127 GGCCCGC-GAAGGA--CCTTAACGCCAGAAA-ATGGTCGGTGAAGACCAGTTCCGCTTCA 182 |||| || |||| | ||||| ||| ||| | || | ||| || ||||| |||| Sbjct 3430 GGCCAGCCGAAGCAAGCCTTATGTCCAAAAAGAGGGGCAGTGCC--CCGCTTCCGTTTCA 3373 Query 183 TTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA 242 | || ||||||||| |||| ||| ||||||||||||||||| |||| ||||||||| Sbjct 3372 TGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTT-CGGCTCCCA 3314 Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3313 CTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 3254 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCG 332 |||||||||||| |||||| |||||||||| Sbjct 3253 CTTCTTTCCCCGTTGATTCTGCCAAGCCCG 3224 >seq24227 Length=52265 Score = 159 bits (176), Expect = 1e-36 Identities = 103/113 (91%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 302 TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGT 361 |||||| |||| ||| |||| ||||||| ||||||||||| ||||||||| || |||||| Sbjct 2753 TCTTCTATCCCTGCTAATTCTGCCAAGCTCGTTCCCTTGGTTGTGGTTTCACTGGATAGT 2812 Query 362 AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2813 AGACAGGGACAGTGGGAATCTCGTTAATCCATTCATTCGCGTCACTAATTAGA 2865 >seq25557 Length=271 Score = 134 bits (148), Expect = 5e-29 Identities = 74/74 (100%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 382 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 198 TCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAG 257 Query 442 AGTCATAGTTACTC 455 |||||||||||||| Sbjct 258 AGTCATAGTTACTC 271 >seq32639 Length=109698 Score = 98.7 bits (108), Expect = 3e-18 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||| ||||||| |||| | | || |||||||| ||||| Sbjct 9900 CTTTTGTTCCACACGAGATTTTTGTTCTCGTTGAGCCTATCGTAAGACACCTGTGTTATC 9841 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 ||||| | ||||||| ||||||| ||||||||||||||| ||| || Sbjct 9840 TTTTAATAAATGTGCCACCCCAGCTAAACTCCCCACCTGATAATATC 9794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634541864704