Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrullus_20lanatus_20[genbank_20GCA_5F000238415.1_202011-12-13]
40,248 sequences; 321,046,825 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq9766 560 3e-157
seq24041 540 3e-151
seq21713 365 1e-98
seq33283 260 4e-67
seq21714 233 6e-59
seq24461 113 1e-22
seq33654 109 2e-21
seq680 93.3 1e-16
>seq9766
Length=43015
Score = 560 bits (620), Expect = 3e-157
Identities = 438/513 (85%), Gaps = 14/513 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || |||||| |||| ||||||||||||||||||
Sbjct 37294 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 37236
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 37235 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 37176
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct 37175 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 37116
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||| ||||| | || |||||
Sbjct 37115 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTT-AATGATGCGTCACCGGCA 37057
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAGGG---- 293
| | || ||||||| || |||||| |||||||| || || | | | || |
Sbjct 37056 CGATAACCGTGCGATTTGTCGAGTTATCATGAATCATCA--GAACAACGGGCAGAGCCCT 36999
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| || ||||||| ||||||||||||| | |||||||||
Sbjct 36998 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCATGTATT 36939
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| |||| || ||| |||||| |||| |||| |||
Sbjct 36938 AGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGATACCATCAAACAAACTATAATTGA 36880
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
|||||||||||||| | |||||||| || | ||| | | ||||||| |||||||| |||
Sbjct 36879 TTTAATGAGCCATTTGTAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATAGCT 36820
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 36819 TAATCTTTGAGACAAGCATATGACTACTGGCAG 36787
>seq24041
Length=6280
Score = 540 bits (598), Expect = 3e-151
Identities = 404/466 (87%), Gaps = 12/466 (3%)
Strand=Plus/Minus
Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct 463 TATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCACCTGCTGCCTTCC 404
Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 403 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCA 344
Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 343 CCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 284
Query 223 AATGAACCATCGCCGGCTC-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGG 281
||||| | |||||||| | | |||| |||||| ||| |||||| |||||||| | |
Sbjct 283 AATGATGCGTCGCCGGCACGATGGCCGTGCGATCCGTCGAGTTATCATGAATCA--TAAG 226
Query 282 AGC--CCCGAAG----GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCG 334
||| | | || |||| | ||||||||||||||| || ||||||| ||||| |
Sbjct 225 AGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTG 166
Query 335 GGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT 394
|||||| | ||| ||||||||||||||||||| |||||||||| |||| || ||| ||
Sbjct 165 GGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAG-CAGATACCAT 107
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTAT 453
|||| |||| ||||||||||||||||||||||||||||||||| || | ||| | | ||
Sbjct 106 CAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCAT 47
Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 499
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 46 ACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACT 1
>seq21713
Length=4003
Score = 365 bits (404), Expect = 1e-98
Identities = 247/274 (90%), Gaps = 2/274 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || |||||| |||| ||||||||||||||||||
Sbjct 2835 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 2893
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2894 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 2953
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct 2954 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 3013
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 3014 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 3073
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAAT 273
| | |||| |||||| ||| |||||| ||||||
Sbjct 3074 CGATGGCCGTGCGATCCGTCGAGTTATCATGAAT 3107
>seq33283
Length=3281
Score = 260 bits (288), Expect = 4e-67
Identities = 229/280 (82%), Gaps = 8/280 (3%)
Strand=Plus/Plus
Query 232 TCGCCGGCTCAA-GGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAA 290
|||||||| | | |||| ||| || |||| |||||| |||||||| ||| | | | |
Sbjct 43 TCGCCGGCACGATGGCCGTGCAATCCGTTGAGTTATCATGAATCATCAAAGCAACGGGCA 102
Query 291 GGGC----GTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGC 345
| || || | ||||||||||||||| || ||||||| ||||| ||||||| | ||
Sbjct 103 GAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGC 162
Query 346 ATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGA 405
| ||||||||||||||||||| |||||||||| |||| | | ||| |||||| |||| |
Sbjct 163 ACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCA-GATACCATCAAACAAACTA 221
Query 406 TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATG 464
|||||||||||||||||||||||||||||||| || ||| || ||||||| |||||
Sbjct 222 TAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCCGAATTAGTTCATACTTACACATG 281
Query 465 CATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||| ||||||||||||||||||||||||||||||||||||
Sbjct 282 CATAGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 321
>seq21714
Length=1715
Score = 233 bits (258), Expect = 6e-59
Identities = 177/205 (86%), Gaps = 3/205 (1%)
Strand=Plus/Plus
Query 302 TTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
||||||||||||||| || ||||||| ||||| |||||| | || |||||||||||||
Sbjct 1502 TTTTATCTAATAAATGCATCCCTTCCAGAAGTAAGGGTTTGTTACACGTATTAGCTCTAG 1561
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
|||||| |||||||| | |||| | | ||| || ||| |||| ||||||||||||||||
Sbjct 1562 AATTACTACGGTTATTCGAGTAGCA-GATACCATAAAACAAACTATAACTGATTTAATGA 1620
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTT-ATACTTAGACATGCATGGCTTAATCTTT 479
||||||||||||||||| || | ||| || ||||||| ||||||||||||||||||||
Sbjct 1621 GCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATCTTT 1680
Query 480 GAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||
Sbjct 1681 GAGACAAGCATATGACTACTGGCAG 1705
>seq24461
Length=40834
Score = 113 bits (124), Expect = 1e-22
Identities = 126/167 (75%), Gaps = 6/167 (4%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| | || ||||| || |||| |||||||||||||| ||
Sbjct 15157 GTACTCATTCCAATTACCAAACTCAAAAA--CCAAGTATTGTCATTTATTGTCACTAACT 15214
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|| | | |||| |||||||| | |||||| |||||||||||||| ||| |||
Sbjct 15215 CCTCTAGA----ATTGAGTAATTTGTGTCCCTGCTACCTTCCTTGGATGTAATAGTTGTT 15270
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGT 167
||| ||||||| ||||| || | ||| ||||||| | | ||||||
Sbjct 15271 TCTTAGGCTCCTTCTCCTCAAGCAAACTCTAATTCTCTGGCACCCGT 15317
>seq33654
Length=52327
Score = 109 bits (120), Expect = 2e-21
Identities = 119/153 (78%), Gaps = 10/153 (7%)
Strand=Plus/Minus
Query 256 CGTTAAGTTATTATGAATCACCAAGGAGCCCC--GAAGGGC----GTTGGTTTTTTATCT 309
|||| |||||| |||||||| || |||| | | || || || | ||||||||
Sbjct 49805 CGTTGAGTTATCATGAATCATCA--GAGCAACTGGCAGAGCCCGCGTCGACCTTTTATCT 49748
Query 310 AATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCA 368
||||||| || ||||||| ||||| ||||||| | ||| ||||||||||||||||||| |
Sbjct 49747 AATAAATGCATCCCTTCCAGAAGTTGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTA 49688
Query 369 CGGTTATCCATGTAGTAAGGTACTATCAAATAA 401
||||||||| |||| || ||| |||||| ||
Sbjct 49687 CGGTTATCCGAGTAG-CAGATACCATCAAACAA 49656
>seq680
Length=9511
Score = 93.3 bits (102), Expect = 1e-16
Identities = 73/86 (85%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | || |||||| |||| ||||||||||||||||||
Sbjct 8809 GTACTCATTCCAATTACCAGACTCGAA-GAGCCCGGTATTGTTATTTATTGTCACTACCT 8867
Query 61 CCCCGTGTCGGGATTGGGTAATTTGC 86
| | | || ||||||||||||||||
Sbjct 8868 CGTCCTATCAGGATTGGGTAATTTGC 8893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509792094208
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