Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03]
14,915 sequences; 357,216,162 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq7100 143 2e-32
seq9526 111 1e-22
>seq7100
Length=3288
Score = 143 bits (158), Expect = 2e-32
Identities = 106/124 (85%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|||||||| ||||||||| |||||||||||||||||| |||| |||||||||| ||
Sbjct 1112 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGCGTCC 1053
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||| | ||||| |||||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1052 TCCTTACGGTTAGACTACCTACTTCTGGTGCAACAAACTCCCATGGTGTGACGGGCGGTG 993
Query 135 TGTA 138
||||
Sbjct 992 TGTA 989
>seq9526
Length=626
Score = 111 bits (122), Expect = 1e-22
Identities = 97/121 (80%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77
||||| ||||||||| ||||||||||||||||||||||| | ||||| | || |||||
Sbjct 161 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCCTACCGTGGTGACCGTCCTCC 220
Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137
||||| ||| | |||||| | |||| | ||||| |||||||||||||||||||
Sbjct 221 TTGCGGTTAGACTAGCCACTTCTGGTAAAACCAATTCCCAGGGTGTGACGGGCGGTGTGT 280
Query 138 A 138
|
Sbjct 281 A 281
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 345551675400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |