Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq7100 143 2e-32 seq9526 111 1e-22 >seq7100 Length=3288 Score = 143 bits (158), Expect = 2e-32 Identities = 106/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||| |||| |||||||||| || Sbjct 1112 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGCGTCC 1053 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| | ||||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct 1052 TCCTTACGGTTAGACTACCTACTTCTGGTGCAACAAACTCCCATGGTGTGACGGGCGGTG 993 Query 135 TGTA 138 |||| Sbjct 992 TGTA 989 >seq9526 Length=626 Score = 111 bits (122), Expect = 1e-22 Identities = 97/121 (80%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 18 TACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTCC 77 ||||| ||||||||| ||||||||||||||||||||||| | ||||| | || ||||| Sbjct 161 TACGGCTACCTTGTTACGACTTCACCCCAGTCATGAATCCTACCGTGGTGACCGTCCTCC 220 Query 78 CGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTGT 137 ||||| ||| | |||||| | |||| | ||||| ||||||||||||||||||| Sbjct 221 TTGCGGTTAGACTAGCCACTTCTGGTAAAACCAATTCCCAGGGTGTGACGGGCGGTGTGT 280 Query 138 A 138 | Sbjct 281 A 281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345551675400