Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03]
14,915 sequences; 357,216,162 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq7050 174 1e-41
seq7100 95.1 1e-17
>seq7050
Length=3442
Score = 174 bits (192), Expect = 1e-41
Identities = 146/176 (83%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 6 ACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACG 65
|||| ||||||||||||| | ||||||| ||||||||||||||||||||| ||||||||
Sbjct 1318 ACGGCGGATGCCTAGGCTTTGAGAGGCGATGAAGGACGTGATAAGCTGCGATAAGCTACG 1377
Query 66 GGGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGA 125
|||| |||||||||| ||| |||||||||| |||||||||| ||||||| | ||| |
Sbjct 1378 GGGAGCGGCACATACGCATTAATCCGTAGATTTCCGAATGGGACAACCCGGCAGGTTGAA 1437
Query 126 GATATATCATAACGCTAGGCGTTAG-GCGAACGTGGGGAACTGAAACATCTAAGTA 180
| | ||| || || || || ||||||||||||||||||||||||||||||
Sbjct 1438 GGCCTGTCACTGCG-TAAGC---AGAGCGAACGTGGGGAACTGAAACATCTAAGTA 1489
>seq7100
Length=3288
Score = 95.1 bits (104), Expect = 1e-17
Identities = 137/188 (73%), Gaps = 18/188 (10%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
||||||||||| ||| || ||||||| ||| ||||| ||| |||||| ||||| ||||
Sbjct 1801 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCTGCGATAAGCTCCGGG 1860
Query 68 GA-TTGGCACATACGAATTGATCCGTAGATATCCGAATGGGG----CAACCCGATATATT 122
|| |||| ||| |||||||| |||| || |||||||| | ||||| ||||
Sbjct 1861 GAGGCGGCAAATATCCTTTGATCCGGAGATTTCTGAATGGGGGAACCCACCCGCTATA-A 1919
Query 123 GGAGATATATCATAACGC--------TAGGC--GTTAGGCGAACGTGGGGAACTGAAACA 172
|| | |||||||| || ||||| | | ||||||| |||||| |||||||
Sbjct 1920 GGCG-GGTATCATAA-GCTGAATACATAGGCTTATGAAGCGAACGAGGGGAAGTGAAACA 1977
Query 173 TCTAAGTA 180
||| ||||
Sbjct 1978 TCTCAGTA 1985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476731107615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |