Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03] 14,915 sequences; 357,216,162 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq12950 89.7 2e-16 seq11782 89.7 2e-16 seq7136 89.7 2e-16 >seq12950 Length=66472 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 65508 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 65566 Score = 78.8 bits (86), Expect = 4e-13 Identities = 49/53 (92%), Gaps = 0/53 (0%) Strand=Plus/Plus Query 7 GAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 65821 GAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 65873 >seq11782 Length=94184 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 83493 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 83551 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| ||||||| |||| |||| |||||||||| ||| Sbjct 64270 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGTCGAGCGAACCGGGAAGAGCCGAGC 64328 >seq7136 Length=2357723 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1381995 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1382053 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1391293 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1391351 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230367783600