Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03]
14,915 sequences; 357,216,162 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq12950 89.7 2e-16
seq11782 89.7 2e-16
seq7136 89.7 2e-16
>seq12950
Length=66472
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 65508 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 65566
Score = 78.8 bits (86), Expect = 4e-13
Identities = 49/53 (92%), Gaps = 0/53 (0%)
Strand=Plus/Plus
Query 7 GAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||| ||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 65821 GAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 65873
>seq11782
Length=94184
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 83493 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 83551
Score = 80.6 bits (88), Expect = 1e-13
Identities = 53/59 (90%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| ||||||||||||| ||||||| |||| |||| |||||||||| |||
Sbjct 64270 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGTCGAGCGAACCGGGAAGAGCCGAGC 64328
>seq7136
Length=2357723
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 1381995 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1382053
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 1391293 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1391351
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230367783600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |