Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20cavaleriei_20[genbank_20GCA_5F002013975.1_202017-03-03]
14,915 sequences; 357,216,162 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq7050 376 5e-102
seq6284 338 1e-90
seq6090 302 1e-79
seq14093 268 2e-69
seq8932 251 2e-64
seq12171 147 5e-33
seq7337 95.1 3e-17
seq1924 87.8 4e-15
seq5578 86.0 1e-14
seq8923 84.2 5e-14
seq14277 73.4 8e-11
>seq7050
Length=3442
Score = 376 bits (416), Expect = 5e-102
Identities = 304/362 (84%), Gaps = 7/362 (2%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
|| ||||||||||||||| | ||||||||||||||| || ||||||||||||||||
Sbjct 3319 TAACCGGCATCTTCACCGATACTACAATTTCACCGAGATCATGGTTGAGACAGTGCCCAG 3260
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|||||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3259 ATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 3200
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-ATTGC-TCTA 178
|||||||||||||||||||||||||||||||||| |||| | |||||| ||| | ||||
Sbjct 3199 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTAAGAGCTTCGAATTACTTCTA 3140
Query 179 ACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
|| ||||||||||||||||||||||||| ||||| |||||||||| ||||||||
Sbjct 3139 ACCCCCTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATCTTGCGA 3080
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
|| ||||| |||||||||||| ||||||||||| ||||||| || ||| || ||| |
Sbjct 3079 TTTTGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTTTTTACTGAGG-CTGAC 3021
Query 299 AT---AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACA 355
|| | || || || ||||||| ||||||| || |||||||| | |||||||||
Sbjct 3020 ATTGCTGTCA-GCGACCTTTCTCCCGAAGTTACAGGTCGATTTTGCCTAATTCCTTAACC 2962
Query 356 AT 357
||
Sbjct 2961 AT 2960
>seq6284
Length=6094
Score = 338 bits (374), Expect = 1e-90
Identities = 289/353 (82%), Gaps = 8/353 (2%)
Strand=Plus/Minus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| | || | ||||||||||| || | ||||||||||||| ||||||
Sbjct 4690 GCATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 4631
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4630 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4571
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
||||||||||||||||| || ||||||| || | ||| | | | || | ||
Sbjct 4570 TAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGCCGGCTCCCCTGTCATCAGGTCACCA 4511
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 4510 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 4451
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| || ||||||||||||||||||||||||| |||||| || ||||| ||| |
Sbjct 4450 GCGGAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACTGCGACCCCCTTTGT 4391
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 4390 GAG-GAGGCACCCCTTCTCCCGAAGTTACGGGGCTATTTTGCCGAGTTCCTTA 4339
>seq6090
Length=481770
Score = 302 bits (334), Expect = 1e-79
Identities = 281/353 (80%), Gaps = 8/353 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||||||| || | |||||| |||| || | ||||||||||||| ||||||
Sbjct 39654 GCATCTTCACATACATGTCTATTTCATCGAGCCTCTCTCCGAGACAGTGCCCAGATCGTT 39713
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 39714 ACGCCTTTCGTACGGGTCGGAACTTACCAGACAAGGAATTTCGCTACCTTAGGACCGTTA 39773
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT-TGCTC---TAACAG 182
|||||| |||||||||| || ||||||| ||| | ||| | | | || | ||
Sbjct 39774 TAGTTATGGCCGCCGTTCACCGGGGCTTCAGTCGCCGGCTCCCCTGTCATCAGGTCACCA 39833
Query 183 ATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTA 242
| |||| ||||||| |||| |||||||||||||| || |||||| ||||| ||||||
Sbjct 39834 ACTTCCTTGACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATACATGGTCTTACGACTTT 39893
Query 243 GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCG---GCCTGTCA 299
|| | ||||||||||||||||||||||||| |||||| || | ||| ||| |
Sbjct 39894 GCGAAGACCTGTGTTTTTGGTAAACAGTCGCCCGGGCCTGGTCACAGCGACCCCCTTTGT 39953
Query 300 TAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTA 352
|| |||||||||||||| | ||||||| ||| ||||||||||||||||||
Sbjct 39954 GAG-GAGGCACCCCTTCTCTCGAAGTTACAGGGCTATTTTGCCGAGTTCCTTA 40005
>seq14093
Length=47550
Score = 268 bits (296), Expect = 2e-69
Identities = 285/376 (76%), Gaps = 20/376 (5%)
Strand=Plus/Minus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 19313 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 19254
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 19253 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 19194
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAAC 180
| |||| |||||| |||||||||||| ||||||| |||| ||| | ||||
Sbjct 19193 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTTCCATTCAAAGCT--------TATAAC 19142
Query 181 AGATCCCC--TTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGA 238
| || || || || ||||||||||||||||| ||||| ||||||||||| || | |
Sbjct 19141 ACTTCTCCTTTTGACTTTCCAGCACCGGGCAGGTGTCAGACTCTATACATCGTGTTACCA 19082
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTC 298
||||||||| ||||||||||| |||||||||||| ||| | | ||| || | |
Sbjct 19081 CTTAGCAGAGTCCTGTGTTTTTAATAAACAGTCGCTACCCCCTGGTATGTGCCGCTTTCC 19022
Query 299 ------ATAGACAG----GCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTC 348
| ||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 19021 TAATCAAAAGATAGGAGAGCACCCCTTCTCCCGAAGTTACGGGGTCATTTTGCCGAGTTC 18962
Query 349 CTTAACAATAGTTCTC 364
||| || ||||||
Sbjct 18961 CTTCGACATGGTTCTC 18946
>seq8932
Length=1192
Score = 251 bits (278), Expect = 2e-64
Identities = 220/272 (81%), Gaps = 9/272 (3%)
Strand=Plus/Minus
Query 2 ACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAA 61
|||| |||||||||| |||| | ||||||||| |||||| | | ||||||| | ||
Sbjct 285 ACCCCGCATCTTCACGGGGAATTCAATTTCACTGAGTCTCTGCTGGAGACAGCGGGGAAG 226
Query 62 TCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 121
|||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 225 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 166
Query 122 CGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGATTGCTCTAACA 181
||||||||||||||||||||||||| ||||||| | | | || |||| | |
Sbjct 165 CGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATCAAGAGC-----TTGC---ACCC 114
Query 182 GATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTT 241
|| | |||||||||||||||||||||||||||| ||||||| || ||| || ||
Sbjct 113 CAT-CAATTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTT 55
Query 242 AGCAGAAACCTGTGTTTTTGGTAAACAGTCGC 273
||||| |||||||||| |||||||||||
Sbjct 54 TGCAGAGTGCTGTGTTTTTAATAAACAGTCGC 23
>seq12171
Length=83436
Score = 147 bits (162), Expect = 5e-33
Identities = 125/154 (81%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
||| | |||||||||| | || | ||||||||||| ||| || ||||||| | |
Sbjct 45101 TACTCCGCATCTTCACGGAGAATTCAATTTCACCGGGTCCATGTCGGAGACAGCGGGGCA 45160
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
||||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||
Sbjct 45161 GTCGTTACACCATTCGTGCAGGTCGCTACTTATGCGACAAGGAATTTCGCTACCTTAGGA 45220
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTT 154
| |||| |||||| |||||||||||| |||||||
Sbjct 45221 CAGTTAGAGTTACTGCCGCCGTTTACCGGGGCTT 45254
>seq7337
Length=334867
Score = 95.1 bits (104), Expect = 3e-17
Identities = 91/117 (78%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 27 ATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGG 86
|||||||||| || || | ||| |||||| |||||| || ||| || |||| |
Sbjct 127889 ATTTCACCGAACCTCTTTTCGAGGTAGTGCCTGGGTCGTTATGCTTTTTGTATAGGTCAG 127830
Query 87 AACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTT 143
|||||||| ||||| |||||| ||||||||||||| |||||||||| | |||| ||
Sbjct 127829 AACTTACCTGACAAAGAATTTTGCTACCTTAGGACTGTTATAGTTATAGACGCCATT 127773
>seq1924
Length=26490
Score = 87.8 bits (96), Expect = 4e-15
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66
|||||| ||| | ||| |||||||| ||| ||||| ||||||||| |||||
Sbjct 19990 GCATCTGCACAGTTATTGTAATTTCACTGAGACTATTATTGAGACAGCTGTTGTATCGTG 20049
Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 126
| | ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 20050 AAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTTCGCTACCTTAGGACCCTCA 20109
Query 127 TAGTTACGGCCGCCGTTTACTGGGGCTT 154
|||||| ||||||| || | |||| ||
Sbjct 20110 TAGTTAAGGCCGCCATTGATCGGGGTTT 20137
>seq5578
Length=1651365
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/115 (77%), Gaps = 4/115 (3%)
Strand=Plus/Plus
Query 239 CTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC---T 295
||| || || | |||||||||||||||| ||| || || |||| || || | || |
Sbjct 1112455 CTTTGCGGAGATCTGTGTTTTTGGTAAATAGTTGCCCGGTCCTAGTCATTGTGACCCCCT 1112514
Query 296 GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCT 350
| || |||||||||||||||| |||||||||||| |||||||| |||||||
Sbjct 1112515 TTGTGAGG-AGGCACCCCTTCTCCCGAAGTTACGGGGTTATTTTGCCAAGTTCCT 1112568
>seq8923
Length=1411
Score = 84.2 bits (92), Expect = 5e-14
Identities = 105/143 (73%), Gaps = 1/143 (1%)
Strand=Plus/Minus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| || | ||||||| ||||||||
Sbjct 456 ATCTGCACAGCTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGTATCGTTAC 397
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
|| ||| ||| | | | | ||| | | ||||| ||||||||||||||||||| | |
Sbjct 396 ACCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGACCCTCA-C 338
Query 129 GTTACGGCCGCCGTTTACTGGGG 151
|||| ||||||| || || ||||
Sbjct 337 GTTAAGGCCGCCTTTAACCGGGG 315
>seq14277
Length=509
Score = 73.4 bits (80), Expect = 8e-11
Identities = 102/143 (71%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68
|||| ||| | ||| ||||||||| ||||| || ||||||||| |||||||
Sbjct 166 ATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATTGAGACAGCTGTTGTATCGTTAA 225
Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128
| ||| ||| | | | | ||| | | || || ||| ||||||||||||||| | ||
Sbjct 226 ATCATTCATGCAAGACCGCATTTAACGGCCAGGGTATTCCGCTACCTTAGGACCCTCATC 285
Query 129 GTTACGGCCGCCGTTTACTGGGG 151
| || ||||||| || | |||||
Sbjct 286 GGTAAGGCCGCCATTGATTGGGG 308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062241543040
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