Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq965 87.8 5e-15 >seq965 Length=51047765 Score = 87.8 bits (96), Expect = 5e-15 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 200 GTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 ||| || |||||| |||| | |||| | ||||||||||| |||||| ||| | ||| Sbjct 10826790 GTGGAGTAGTGAATTGCGCAAATATCAGAAGGAACACCAAAGGCGAAAGCACTCTATTGG 10826849 Query 260 GATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 319 | ||||||||| || || ||||| ||| ||| || |||||||||||| ||| Sbjct 10826850 GTCAACACTGACACTGGGAGACAAAAGCTAGGGAAGCGAAGGGGATTAGATACCTCAGTA 10826909 Query 320 GTCCACGCCCTAAACGAT 337 |||| ||| |||||||| Sbjct 10826910 GTCCTAGCCATAAACGAT 10826927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289581971392