Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1340 87.8 2e-15 >seq1340 Length=31410901 Score = 87.8 bits (96), Expect = 2e-15 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 80 TAAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGG 139 ||||||||| || ||| | |||||||||||||||| || ||| ||| | || ||| | Sbjct 27106028 TAAGGAACTCGGTAAAATAGCCCTGTAACTTCGGGAGAAGAGGTGCCTCCTCACAAA--G 27106085 Query 140 GAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCT 189 | || ||||| || ||| || ||| |||||||| |||||||||||| || Sbjct 27106086 GGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACACAGGTCT 27106135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531192805892