Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1282 89.7 2e-16 seq1 89.7 2e-16 >seq1282 Length=25111302 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 11279121 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 11279063 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 11289121 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 11289063 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 11298825 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 11298767 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 16163384 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 16163442 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 16187135 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 16187193 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 16195752 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 16195810 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 16204891 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 16204949 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 16214491 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 16214549 >seq1 Length=28940139 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 15440589 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 15440531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230396980320