Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq616 77.0 6e-12 >seq616 Length=36375926 Score = 77.0 bits (84), Expect = 6e-12 Identities = 109/152 (72%), Gaps = 10/152 (7%) Strand=Plus/Minus Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCT-TCTTA-GTAAATAACAA 178 |||| |||||||||| || ||||| || ||| |||||| | ||| | |||| Sbjct 557611 TGGTCACCGGGTCGGAGTACCAAGGAGCTCCAAGTGGGTTTTATCTGGCGGAAATTGG-- 557554 Query 179 CAAAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGG 238 ||| |||||||| |||||| || || |||| || |||||||||||||| Sbjct 557553 ------GGAAGGGCAAAAGGTGAAATTGGAGAAAATCAATGTGCCCGATGAATTTTCTGG 557500 Query 239 ATTTGTGCAATCTGGATGCTGTGTGGAGATCT 270 ||||| |||||||| ||||| || ||||||| Sbjct 557499 GTTTGTTCAATCTGGTTGCTGCGTTGAGATCT 557468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918387160768