Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20clementina_20[refseq_20GCF_5F000493195.1_202013-11-08] 1,398 sequences; 301,364,702 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq965 84.2 5e-14 >seq965 Length=51047765 Score = 84.2 bits (92), Expect = 5e-14 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 164 GGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATT 223 |||| |||| | |||| || |||||| |||| || ||||| |||| | |||| Sbjct 10826756 GGCTGGAGTATAATAGGGATAAAGGGAATTTTCAGTGGAGTAGTGAATTGCGCAAATATC 10826815 Query 224 AGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAA 283 || |||||||||| |||||| || | ||| |||||||||| | | ||| Sbjct 10826816 AGAAGGAACACCAAAGGCGAAAGCACTCTATTGGGTCAACACTGACACTGGGAGACAAAA 10826875 Query 284 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACT 342 || ||| ||| || |||||||||||| ||||||| ||| ||||||||| ||||| Sbjct 10826876 GCTAGGGAAGCGAAGGGGATTAGATACCTCAGTAGTCCTAGCCATAAACGATGGATACT 10826934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203183179264