Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20maxima_20[genbank_20GCA_5F002006925.1_202017-03-07] 1,504 sequences; 345,757,338 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq1346 138 8e-31 seq1282 127 1e-27 >seq1346 Length=3789 Score = 138 bits (152), Expect = 8e-31 Identities = 105/124 (85%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||| |||| |||||||||| || Sbjct 1515 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGCGTCC 1456 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| |||||||||||| |||||| |||||||||||||||||||||||| Sbjct 1455 TCCTTGCGGTTAGACTACCTACTTCTGGTGCAACAAACTCCCATGGTGTGACGGGCGGTG 1396 Query 135 TGTA 138 |||| Sbjct 1395 TGTA 1392 >seq1282 Length=4878 Score = 127 bits (140), Expect = 1e-27 Identities = 103/124 (83%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 |||||||| ||||||||| |||||||||||||||||| |||| |||||||||| || Sbjct 3466 CCCTACGGCTACCTTGTTACGACTTCACCCCAGTCATCGGCCACACCGTGGTAAGCGTCC 3525 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| |||||||||||| ||||| || ||||||||||||||||||||| Sbjct 3526 TCCTTGCGGTTAGACTACCTACTTCTGGTGCAA--CAAACCCATGGTGTGACGGGCGGTG 3583 Query 135 TGTA 138 |||| Sbjct 3584 TGTA 3587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345595127040