Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03] 32,731 sequences; 404,954,971 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq28844 89.7 2e-16 seq27597 89.7 2e-16 seq8954 89.7 2e-16 seq26839 84.2 1e-14 seq2450 71.6 6e-11 >seq28844 Length=837144 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| |||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct 657833 GGAAAAGAAACTTACCAAGATTCCCTCAGTAACGGCGAGCGAACTGGGAAGAGCCCAGC 657891 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 726381 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 726439 Score = 80.6 bits (88), Expect = 1e-13 Identities = 53/59 (90%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| ||||||| |||| |||| |||||||||| ||| Sbjct 650803 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGTCGAGCGAACCGGGAAGAGCCGAGC 650861 Score = 78.8 bits (86), Expect = 4e-13 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||| ||||||||||||| |||||| ||||| |||| |||||||||||||| Sbjct 727486 AAAGAAACTTACCAGGATTCCCTTAGTAACAGCGAGCGAACCGGGAAGAGCCCAGC 727541 >seq27597 Length=212756 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 203154 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 203096 >seq8954 Length=20235 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 4819 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 4761 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 14842 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 14784 >seq26839 Length=941352 Score = 84.2 bits (92), Expect = 1e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 || ||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 541589 GGGAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 541647 >seq2450 Length=635042 Score = 71.6 bits (78), Expect = 6e-11 Identities = 48/54 (89%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGC 54 |||||| ||||| ||||||||||||| |||||| ||||| |||| ||||||||| Sbjct 101017 GGAAAAAAAACTTACCAGGATTCCCTTAGTAACAGCGAGCGAACCGGGAAGAGC 100964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230329301040