Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20medica_20[genbank_20GCA_5F002013955.1_202017-03-03] 32,731 sequences; 404,954,971 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1917 210 5e-52 seq30757 206 6e-51 seq26183 205 2e-50 seq23344 205 2e-50 seq6699 205 2e-50 seq27274 199 8e-49 seq15221 197 3e-48 seq31224 196 1e-47 seq27099 187 5e-45 seq30456 185 2e-44 seq29511 179 8e-43 seq20223 178 3e-42 seq25119 168 1e-39 seq10825 163 6e-38 seq18899 111 3e-22 seq27062 100 6e-19 seq16343 98.7 2e-18 seq11118 75.2 2e-11 >seq1917 Length=46836 Score = 210 bits (232), Expect = 5e-52 Identities = 167/198 (84%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 ||| || | ||| | |||||| | | |||||||||||| || |||||||||||||| Sbjct 15126 CTTCACGACCCGTGGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCC 15183 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||| || |||||||||||||||||| ||||||||||||| |||||||||||| |||| Sbjct 15184 ATTGCGGAAAATTCCCCACTGCTGCCTCTCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 15243 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||||||| ||||| |||||| ||| |||| |||||||||| ||| ||| ||||| Sbjct 15244 TGTGGCTGATCATGCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCA 15303 Query 181 CCAACTAGCTAATCCGAC 198 |||||||||||||| ||| Sbjct 15304 CCAACTAGCTAATCAGAC 15321 >seq30757 Length=100318 Score = 206 bits (228), Expect = 6e-51 Identities = 180/220 (82%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 11462 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 11405 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 11404 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 11345 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 11344 AGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 11285 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 11284 GACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGC 11245 >seq26183 Length=286087 Score = 205 bits (226), Expect = 2e-50 Identities = 148/170 (87%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||| | ||||||| || |||||||||||||||||| Sbjct 241560 CACGCGGCATTG-CTCCGCCAGGCTTTTGGCCATTGTGGAAAATTCCCCACTGCTGCCTC 241502 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| ||||||||||||| |||||| | Sbjct 241501 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTTGGACCAGCT 241442 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 241441 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 241392 >seq23344 Length=366299 Score = 205 bits (226), Expect = 2e-50 Identities = 168/202 (83%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| |||||| |||| ||||||| |||||||||||||||||||| |||||| Sbjct 126189 CCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCC 126132 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 |||||||||| ||||| |||||| || |||||||||||| |||||||| |||||||||| Sbjct 126131 CACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCG 126072 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCG 196 ||||||| || | ||| | | |||||| |||| |||||| |||||||| ||||| | Sbjct 126071 AAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCTGACCAACTACCTAATACT 126012 Query 197 ACCTAGGCTCATCTGATAGCGC 218 || ||||||||| | ||||| Sbjct 126011 ACGCAGGCTCATCAAACAGCGC 125990 Score = 188 bits (208), Expect = 2e-45 Identities = 170/210 (81%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 140476 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 140419 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| ||||| |||||| || |||||||||||| || Sbjct 140418 CCATTGTCCAAGATTCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCC 140359 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| ||||||||| ||||||| || | ||| | | |||||| |||| ||| | Sbjct 140358 AGTGTGGTTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTATGT 140299 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCAT 208 |||||||| ||||| | || |||||||| Sbjct 140298 GACCAACTACCTAATACTACGCAGGCTCAT 140269 Score = 187 bits (206), Expect = 5e-45 Identities = 170/211 (81%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| ||||||||| Sbjct 248427 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGGGCTTTCGC 248484 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| ||||||||||||| || ||||| |||||| || |||||||| ||| || Sbjct 248485 CCATTGTCCAAGATTCCCCACTGCTACCCCCCGTGGGAGTCCGGGCCGTGTCTTAGTCCC 248544 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 248545 AGTGTGGCTGATCATCCGGAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 248604 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||| ||||| | ||||||||| Sbjct 248605 GACCAACTACCTAATATTATGCAGGCTCATC 248635 >seq6699 Length=24755 Score = 205 bits (226), Expect = 2e-50 Identities = 234/309 (76%), Gaps = 18/309 (6%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| ||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 9033 CACGTGGCATTG-CTCTGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 9091 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| ||| |||| |||||||||||||| |||||| | Sbjct 9092 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCGGACCAGCT 9151 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGACCTAGGCTCAT 208 || ||| ||||||| || ||| ||| ||||||||||||||||||| ||| | || | | Sbjct 9152 ACTGATTATCGCCTTAGTAAGCTATTGCCTCACCAACTAGCTAATCAGACGCAAGCCCCT 9211 Query 209 CTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGTAGGACGTATGCGGTATTAGC 268 | | | |||| || ||| |||| | | | || || | ||||||||| Sbjct 9212 C------CTC-AGGC-----GGATTCCTCCTTTTGCTCCT-CCACCTACGGGGTATTAGC 9258 Query 269 GTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCCG 326 ||| |||| || | ||| || ||| ||||| ||| || || ||||||||||| Sbjct 9259 AGCCGCTTCCAGCTATTGTTCCC--CTCCCAAGGGCAGGTTCTTATGCGTTACTCACCCG 9316 Query 327 TCCGCCGCT 335 |||||| || Sbjct 9317 TCCGCCACT 9325 >seq27274 Length=221448 Score = 199 bits (220), Expect = 8e-49 Identities = 147/170 (86%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||||||||||| || |||||||||| ||||||| || |||||||||||||||||| Sbjct 29893 CACGCGGCATTA-CTCCGTCAGGCTTTCAGCCATTGTGGAAAATTCCCCACTGCTGCCTC 29951 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||||||||||| |||||||||||| |||||||| |||||||||||||| ||| || | Sbjct 29952 TCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCTCTCGGACTAGCT 30011 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 30012 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 30061 Score = 181 bits (200), Expect = 2e-43 Identities = 143/170 (84%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| || ||||| || |||||||||||| |||||| || |||||||||||||||||| Sbjct 111124 CACACGACATTG-CTCCATCAGGCTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTC 111182 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 || ||||||||||| |||||||||||| ||||||| |||| ||||||||| |||||| | Sbjct 111183 CCATAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTAGCTGACCATCCTCTCGGACCAGCT 111242 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| | |||||||| || ||| ||||||||| ||||||||| ||| Sbjct 111243 ACTGATCATTGCCTTGGTAAGTTATTGCCTCACCAATTAGCTAATCAGAC 111292 >seq15221 Length=15544 Score = 197 bits (218), Expect = 3e-48 Identities = 146/169 (86%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||||||||||||||||| || |||||||||||||||||| Sbjct 45 CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 103 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||| ||||| ||| || | Sbjct 104 CCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATGCTCTCGGACTAGCT 163 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGA 197 || |||| ||||||| || ||| ||| |||||||||||||||||| || Sbjct 164 ACTGATCTTCGCCTTAGTAAGCTATTGGCTCACCAACTAGCTAATCAGA 212 >seq31224 Length=89923 Score = 196 bits (216), Expect = 1e-47 Identities = 146/170 (86%), Gaps = 1/170 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || || |||||| || ||||||||||| ||||||| || ||||||||||||||||| Sbjct 43078 CATGCAGCATTG-CTCCGTCAGGCTTTCGTCCATTGTGGAAAATTCCCCACTGCTGCCTG 43020 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||| |||||||| |||||||||||| ||||||| |||||||||||||| |||||| | Sbjct 43019 CCGTAAGAGTCTGGGCCGTGTCTCAGTCGCAGTGTGGCTGATCATCCTCTCGGACCAGCT 42960 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| ||||||||||||||||||| ||| Sbjct 42959 ACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 42910 Score = 196 bits (216), Expect = 1e-47 Identities = 147/170 (86%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||||| || |||| |||| |||||||| || |||||||||||||||||| Sbjct 77031 CACGCGGCATTG-CTCCGTCAGACTTTTGCCCATTGCGGAAAATTCCCCACTGCTGCCTC 77089 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| | Sbjct 77090 CCGTAGGAGTCTGGGCCGTGTCTCAGT-CCAGTGTGGCTGATCATCCTCTCGGACCAGCT 77148 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||| ||||| ||| ||| |||||||||||||| |||| ||| Sbjct 77149 ACTGATCATCGCTTTGGTAAGCTATTGCCTCACCAACTAGCAAATCAGAC 77198 >seq27099 Length=3058 Score = 187 bits (206), Expect = 5e-45 Identities = 233/310 (75%), Gaps = 22/310 (7%) Strand=Plus/Minus Query 30 ACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCC 89 |||||||||| || ||||||||||| |||||| || |||||| |||||| ||||| Sbjct 312 ACGCGGCATTT-CTCCGTCAGGCTTTCGTCCATTGCGGAAAATTCCCTACTGCTACCTCC 254 Query 90 CGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTA 149 ||||||||||||| ||||||||||| ||| |||| ||||||||||||| ||||| || Sbjct 253 CGTAGGAGTCTGGGTCGTGTCTCAGTCCCAATGTGGTTGATCATCCTCTCGGACCAACTA 194 Query 150 CGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC-CTAGGCTCAT 208 | |||| || |||||| ||| |||||||| |||||||||||||| ||| | || | | Sbjct 193 CTGATCATCATCTTGGTAAGCTATTACCTCTCCAACTAGCTAATCAGACACGAGCCCCTC 134 Query 209 CTGATAGCGCAAGGCCCGAAGGTCC-CCTGCTTTCTCCCGTAGGACGTATGCGGTATTAG 267 || || ||| || ||| ||| ||| | || ||| | || | |||||||| Sbjct 133 CT-----CG---GGC---AAATTCCTCCT--TTTGTTCCTTAG--CCTACGGGGTATTAG 89 Query 268 CGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGATTCCTAGGCATTACTCACCC 325 | |||||||| ||| | ||| || ||| ||||| ||| || || |||||||||| Sbjct 88 CAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGTTCTTACGCGTTACTCACCC 31 Query 326 GTCCGCCGCT 335 ||||||| || Sbjct 30 GTCCGCCACT 21 >seq30456 Length=110563 Score = 185 bits (204), Expect = 2e-44 Identities = 175/220 (80%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| ||||| |||| || |||| ||||||||| Sbjct 93801 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCAATATTG-CTAGATCGGGCTTTCGC 93744 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||||||||| || |||||||| || |||||||||||| | Sbjct 93743 CCATTGTCCAAGATTCCCCACTGCTGCCCCCTGTAGGAGTTCGGGCCGTGTCTCAGTCCT 93684 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| |||||||| | ||||||| || | ||| | | |||||| |||| |||||| Sbjct 93683 AGTGTGGCTGATCATTCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 93624 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGC 218 |||||||| ||||| | || ||||||||| | ||||| Sbjct 93623 GACCAACTACCTAATACTACACAGGCTCATCAAACAGCGC 93584 >seq29511 Length=805871 Score = 179 bits (198), Expect = 8e-43 Identities = 159/196 (81%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 || || | ||| || |||||| | | |||| | ||||| | | ||||||||||||||| Sbjct 249072 TTCACGAACCGTAGGCCTTCTACCTC-CACGAGACATTGCTTTG-TCAGGCTTTCGCCCA 249129 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||||||| ||||||| ||||||||| ||| |||||||||| ||||| Sbjct 249130 TTGCGGAAAATTCCCCACTACTGCCTCGCGTAGGAGTTTGGGATGTGTCTCAGTCCCAGT 249189 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| |||||||||||||| |||||| || |||| ||||||| || ||| ||| |||||| Sbjct 249190 GTGGCTGATCATCCTCTCGGACCAGCTATTGATCATCGCCTTAGTAAGCTATTGCCTCAC 249249 Query 182 CAACTAGCTAATCCGA 197 ||||||||||||| || Sbjct 249250 CAACTAGCTAATCAGA 249265 >seq20223 Length=10564 Score = 178 bits (196), Expect = 3e-42 Identities = 168/211 (80%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAA--GACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGC 58 |||||||| | | | | ||||||| ||| |||||| |||| ||||||| |||||||| Sbjct 2420 CTTTACAAGCGGCATTGCCCTTCTT-CACTCACGCGATATTG-CTGGATCGAGCTTTCGC 2363 Query 59 CCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCC 118 ||||||||||| |||||||||| ||||| ||||| |||||| || |||||||||||| | Sbjct 2362 CCATTGTCCAAGATTCCCCACTACTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCT 2303 Query 119 AGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCT 178 |||||| ||||||||| ||||||| || | ||| | | |||||| |||| |||||| Sbjct 2302 AGTGTGGCTGATCATCTGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCTTTACCT 2243 Query 179 CACCAACTAGCTAATCCGACCTAGGCTCATC 209 |||||||| ||||| | ||||||||| Sbjct 2242 GACCAACTACCTAATATTATGCAGGCTCATC 2212 >seq25119 Length=352517 Score = 168 bits (186), Expect = 1e-39 Identities = 140/170 (82%), Gaps = 1/170 (1%) Strand=Plus/Plus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 || ||| ||||| || |||||||||| ||||||| || |||||||||||||||||| Sbjct 173088 CATGCGACATTG-CTCCGTCAGGCTTTCACCCATTGCAGAAAATTCCCCACTGCTGCCTC 173146 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||| |||||||||| | ||||||| | | |||||| ||||| ||||||| ||| |||| Sbjct 173147 CCGCAGGAGTCTGGGCAATGTCTCAATCCTAGTGTGGCTGATTATCCTCTTGGACTAGTT 173206 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || |||| |||||||||| ||| ||| || |||||||||||||||| ||| Sbjct 173207 ACTGATCATCGCCTTGGTAAGCTATTGCCACACCAACTAGCTAATCAGAC 173256 >seq10825 Length=466 Score = 163 bits (180), Expect = 6e-38 Identities = 109/119 (92%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || ||| ||||| | ||| |||||||||| ||||||||||||||| ||||| Sbjct 350 CTTTACAACCCTAAGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 407 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 119 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 408 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCA 466 >seq18899 Length=407572 Score = 111 bits (122), Expect = 3e-22 Identities = 81/94 (86%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 105 CGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTG 164 ||||||||||| ||| |||| |||||||||||||| |||||| ||| | || ||||||| Sbjct 10860 CGTGTCTCAGTCCCAATGTGGCTGATCATCCTCTCGGACCAGCTACTGGTCATCGCCTTA 10801 Query 165 GTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 || ||| ||| ||||||||||||||||||| ||| Sbjct 10800 GTAAGCTATTGCCTCACCAACTAGCTAATCAGAC 10767 >seq27062 Length=919105 Score = 100 bits (110), Expect = 6e-19 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| |||||||||||||| |||||| ||| |||| |||||||||| ||| ||| ||||| Sbjct 419731 TGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCA 419672 Query 181 CCAACTAGCTAATCCGAC 198 |||||||||||||| ||| Sbjct 419671 CCAACTAGCTAATCAGAC 419654 >seq16343 Length=436327 Score = 98.7 bits (108), Expect = 2e-18 Identities = 125/170 (74%), Gaps = 4/170 (2%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 ||| |||||||| || ||| || | ||||||| || |||||||||||||||| | Sbjct 159848 CACACGGCATTG-CTCCTTCAAATTTACTCCCATTGCAGAAAATTCCCCACTGCTGCCCC 159790 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 ||||||| ||| | | ||||||| | | ||||| ||||||||||||| | ||| | Sbjct 159789 ---TAGGAGTTTGGGCTGCATCTCAGTCCTAATGTGATTGATCATCCTCTCGAATCAGCT 159733 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAATCCGAC 198 | |||| ||| || | | ||| ||||||||||||| ||||| ||| Sbjct 159732 ATTGATCATCGTCTCAATAAATTATTGCCTCACCAACTAGTTAATCAGAC 159683 >seq11118 Length=2145719 Score = 75.2 bits (82), Expect = 2e-11 Identities = 52/58 (90%), Gaps = 1/58 (2%) Strand=Plus/Minus Query 31 CGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||| |||| ||||||| |||||||||||||||||||| ||||||||||||||| || Sbjct 609703 CGCGATATTG-CTGGATCGGGCTTTCGCCCATTGTCCAAGATTCCCCACTGCTGCATC 609647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071649123680