Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq58 89.7 2e-16 seq20 89.7 2e-16 seq12 89.7 2e-16 seq7 89.7 2e-16 >seq58 Length=473374 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| |||||||||| || ||||||||||||||||| |||||||||||||| Sbjct 280886 GGAAAAGAAACTTACCAGGATTCACTTAGTAACGGCGAGTGAACCGGGAAGAGCCCAGC 280828 Score = 84.2 bits (92), Expect = 1e-14 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||| ||| Sbjct 285471 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGTCGAGTGAACCGGGAAGAGCCGAGC 285413 >seq20 Length=1106287 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 185241 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 185299 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 190846 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 190904 Score = 75.2 bits (82), Expect = 5e-12 Identities = 52/59 (88%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| |||| |||||||| ||||| ||||||||| | ||||||||||||| Sbjct 182793 GGAAAAGAAACTTACCAAGATTCCCTTAGTAATGGCGAGTGAGCCAGGAAGAGCCCAGC 182851 >seq12 Length=2762994 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1313401 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 1313459 >seq7 Length=32205869 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| ||||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 23020205 GGAAAAGAAACTTACCAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 23020147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230389536960