Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= AAMG01001756.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq9 77.0 6e-12 >seq9 Length=18450785 Score = 77.0 bits (84), Expect = 6e-12 Identities = 109/152 (72%), Gaps = 10/152 (7%) Strand=Plus/Plus Query 121 TGGTTACCGGGTCGGTTTATCAAGGGGCCCCACATGGGTTCT-TCTTA-GTAAATAACAA 178 |||| |||||||||| || ||||| || ||| |||||| | ||| | |||| Sbjct 1250069 TGGTCACCGGGTCGGAGTACCAAGGAGCTCCAAGTGGGTTTTATCTGGCGGAAATTGG-- 1250126 Query 179 CAAAAAGGATGGGCAAAATAGTAAATTGACAAAGATTGATGTTCCTGATGAATTTTCTGG 238 ||| |||||||| |||||| || || |||| || |||||||||||||| Sbjct 1250127 ------GGAAGGGCAAAAGGTGAAATTGGAGAAAATCAATGTGCCCGATGAATTTTCTGG 1250180 Query 239 ATTTGTGCAATCTGGATGCTGTGTGGAGATCT 270 ||||| |||||||| ||||| || ||||||| Sbjct 1250181 GTTTGTTCAATCTGGTTGCTGCGTTGAGATCT 1250212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918355512704