Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_031903.1 Length=172345 Score E Sequences producing significant alignments: (Bits) Value seq4844 621 4e-173 seq2 291 9e-74 seq3 235 6e-57 seq1 192 6e-44 seq20 116 4e-21 seq8 113 5e-20 seq7 100 3e-16 seq218 91.5 2e-13 >seq4844 Length=160129 Score = 621 bits (688), Expect = 4e-173 Identities = 732/988 (74%), Gaps = 2/988 (0%) Strand=Plus/Minus Query 159803 TTCTGCGAGTGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTCCTG 159862 ||||| | ||| ||||| || | |||||||| || | |||||||| || || || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 159863 ATGATCCCAACTCTGTTGGCAGCAACTATCTGC-TTCATCGTCGCCTTCATCGCTGCTCC 159921 |||||||| ||| | ||| | |||||| |||| || || |||||||||| |||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 159922 CCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTACGGTAACAA 159981 || || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 159982 CATCATCTCTGGTGCAGTTGTTCCCTCTTCCAACGCAATTGGTCTTCACTTCTATCCCAT 160041 || || |||||||| || |||| |||| || || ||| | || || || || || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 160042 TTGGGAAGCCGCATCGCTCGACGAGTGGCTCTATAACGGTGGTCCTTTCCAACTCGTAGT 160101 |||||||| ||||| | || || ||| | || || || ||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 160102 CTTCCACTTCCTGATCGGCATCTATGCCTATATGGGTCGTGAGTGGGAACTCTCTTACCG 160161 | |||||| | | || | | || |||||||||||||||||||| || ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 160162 TCTCGGTATGCGTCCCTGGATCTGTGTTGCATACTCTGCTCCAGTCGCTGCTGCTTCTGC 160221 ||| ||||||||||| ||||| ||||||||| || ||||| || || || || |||| Sbjct 1164 TCTGGGTATGCGTCCTTGGATTGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTGC 1105 Query 160222 TGTATTCCTCGTCTACCCCTTCGGTCAGGGTTCTTTCTCCGATGCTATGCCTCTTGGTAT 160281 ||| ||| | ||||||| ||||||| || ||| || |||| ||||||||| || || Sbjct 1104 TGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAAT 1045 Query 160282 CTCTGGTACTTTTAACTATATGCTTGTATTCCAAGCAGAACACAATATCCTTATGCATCC 160341 |||||||||||| || | ||| |||||||||| || || ||||| ||||||||||| || Sbjct 1044 CTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 985 Query 160342 GTTCCACATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCTGTTCTCTGCTATGCATGG 160401 ||||||||| | || || ||||| |||||||| || || || ||| |||||||||||| Sbjct 984 ATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATGG 925 Query 160402 ATCTCTGGTTACTTCTAGTCTCGTCAGAGAGACGACAGAAACTGAGTCCCAGAACTATGG 160461 || |||| || |||||| | |||| || || ||||||| ||| || || || Sbjct 924 TTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAGG 865 Query 160462 TTACAAGTTCGGTCAAGAGGAAGAGACTTACAACATCGTCGCAGCACATGGCTACTTCGG 160521 ||||| ||||||||||||||||| ||||| || ||||| || || || || || || || Sbjct 864 TTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTGG 805 Query 160522 TCGTTTGATCTTCCAATATGCATCCTTTAACAACTCACGCTCTCTGCACTTCTTCCTCGC 160581 || ||||||||||||||||| || ||||| || || ||| | || |||||||| || Sbjct 804 CCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGGC 745 Query 160582 TGCTTGGCCTGTTGTTGGAATCTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAA 160641 |||||||||||| || || |||||||||||||| | ||| || || ||||| ||||| Sbjct 744 TGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAA 685 Query 160642 TCTCAATGGTTTCAACTTCAACCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACAC 160701 | ||||||||||| |||||||| || | | || | ||||| | || | || || Sbjct 684 CTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATAC 625 Query 160702 TTGGGCAGACGTGCTTAACCGCGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGC 160761 ||||| || | |||| || ||| || || |||||||| ||||| || ||||| || Sbjct 624 CTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGC 565 Query 160762 TCACAACTTCCCTCTCGACCTTGCTGCT 160789 ||| ||||||||||| ||||| |||||| Sbjct 564 TCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 554 bits (614), Expect = 5e-153 Identities = 725/994 (73%), Gaps = 7/994 (1%) Strand=Plus/Plus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 35865 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 35924 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || ||||| || || | || ||||||||||||||| | || Sbjct 35925 TTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 35984 Query 161665 AGTTCCTATCTTGAGGG-TGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723 ||||||||| | || || ||||| || | | || || |||||| ||||| ||| | Sbjct 35985 AGTTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCCGCAGTTTCGACTCCTGCTAATAG 36043 Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782 | | | |||||| || || || || ||||||||||| || ||||| ||||| | | Sbjct 36044 TTTAGCGCATTCT-TTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCGCT 36102 Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTCGCTCTGATTG 161842 || ||| | || || || |||| |||||| || || ||||| ||||||| || || | Sbjct 36103 GGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACACGGTGCTTTCGGACTAATAG 36162 Query 161843 GATTCATGCTTCGTCAGTTTGAACTTGCTCG-TCTTATCGGTATCCGTCCTTACAATGCT 161901 | |||||| | ||||| |||||||||||||| ||| || | | || ||||| ||||| Sbjct 36163 GTTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAAT-TGCGACCTTATAATGCA 36221 Query 161902 ATTGCTTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTTCTCATATATCCTCTGGGA 161961 || || ||||||| ||| |||||||||||||| || || || || ||||| || || Sbjct 36222 ATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGGT 36281 Query 161962 CAGTCGTCCTGGTTCTTCGCGCCATCGTTTGGGGTTGCCGCTATTTTCAGGTTCTTACTT 162021 ||||| |||||||| ||||| ||||| || || || || || | ||| | ||| Sbjct 36282 CAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCTT 36341 Query 162022 TTCCTACAAGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGT 162081 || | ||||| || || |||||||| | || || || || |||||||| || || ||| Sbjct 36342 TTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGT 36401 Query 162082 ATCTTGGGTGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTAC 162141 | ||||| | |||| |||| | ||| ||||| || | || || ||||| || | | Sbjct 36402 GTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTT 36461 Query 162142 CAAGATGGTGAACAAGCAAATACTTTCAAGGCTTTTGACTCTACGCAAGAGGAGGAGACT 162201 |||||||||| ||||| || ||| |||||| || | ||||||| || || || Sbjct 36462 GAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAACC 36521 Query 162202 TACTCGATGGTTACTGCGAACCGTTTCTGGTCACAGATCTTCGGTATTGCTTTTAGTAAT 162261 || |||||||| || || ||||| || ||||| || ||||| || |||||||| ||| Sbjct 36522 TATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAAT 36581 Query 162262 AAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCT 162321 || |||||||| |||||||||||| | || || || || | ||| | |||| ||| || Sbjct 36582 AAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCT 36641 Query 162322 ATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATT 162381 | || | | || || || || || || |||||||| ||||| || || ||||| || Sbjct 36642 CTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATC 36701 Query 162382 CGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATATCCTCTTGAATGAA 162441 ||||||||||| |||||||||||||| || |||||||| || ||||| || || || || Sbjct 36702 CGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGAG 36761 Query 162442 GGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACTTTGTATTCCCTGAG 162501 ||| ||||||| ||| |||| | ||||| || ||||| ||| || ||||||||||| Sbjct 36762 GGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAG 36821 Query 162502 GAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || ||||| || | || ||||| || | ||||| Sbjct 36822 GAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 36854 >seq2 Length=30838379 Score = 291 bits (322), Expect = 9e-74 Identities = 399/555 (72%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 159830 AACCGCCTCTATGTCGGTTGGTTCGGCGTCCTGATGATCCCAACTCTGTTGGCAGCAACT 159889 |||||||| || | |||||||| || || |||||||||| ||| | ||| | |||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 159890 ATCTGC-TTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGACATCGATGGCATCCGTGA 159948 |||| || || |||||||||| | |||||| || || || || || || || ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 159949 ACCCGTCGCTGGTTCACTCATGTACGGTAACAACATCATCTCTGGTGCAGTTGTTCCCTC 160008 || || ||| || || | || || ||||| || || |||||||| || |||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 160009 TTCCAACGCAATTGGTCTTCACTTCTATCCCATTTGGGAAGCCGCATCGCTCGACGAGTG 160068 ||| || || ||| | || || || || || |||||||| ||||| | || || || Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 160069 GCTCTATAACGGTGGTCCTTTCCAACTCGTAGTCTTCCACTTCCTGATCGGCATCTATGC 160128 | | || || || ||||||| | || | || | |||||| | | || | | Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 160129 CTATATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTATGCGTCCCTGGATCTGTGT 160188 || |||||||||||||||||||| || |||| | ||||||| ||| ||||| ||| Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 160189 TGCATACTCTGCTCCAGTCGCTGCTGCTTCTGCTGTATTCCTCGTCTACCCCTTCGGTCA 160248 |||||| || |||| || || || || || |||| ||| | ||||||| | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 160249 GGGTTCTTTCTCCGATGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGCTTGT 160308 || ||| || |||| ||||||||| || |||||||||||||| |||| ||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 160309 ATTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGGGT 160368 ||| | || || ||||| ||||||||||| || ||||||||| | || | ||| | || Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 160369 ATTCGGTGGATCTCT 160383 ||| || || || || Sbjct 6214301 ATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 235 bits (260), Expect = 6e-57 Identities = 373/542 (69%), Gaps = 37/542 (7%) Strand=Plus/Minus Query 162030 AGGTTTCCACAATTGGACGCTTAATCCGTTCCACATGATGGGTGTCGCAGGTATCTTGGG 162089 ||| || || |||||||| | || || || || |||||||| || || ||| | ||||| Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 162090 TGGTGCTTTGCTCTCTGCTATTCACGGTGTGACTGTTGAAAACACGCTCTACCAAGATGG 162149 | |||| |||| | ||| ||||| || | || || ||||| || | | ||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 162150 TGAACAAGCAAATACTTT-------------------CAAG-----------------GC 162173 ||| ||||| || || |||| || Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 162174 TTTTGACTCTACGCAAGAGGAGGAGACTTACTCGATGGTTACTGCGAACCGTTTCTGGTC 162233 |||| || | ||||||| || || || || |||||||| || || ||||| || ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 162234 ACAGATCTTCGGTATTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGT 162293 || ||||| || |||||||| ||||| |||||||| |||||||||||| | || || Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 162294 TCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCG 162353 || || | ||| | |||| ||| || | || | | || || || | || || || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 162354 TGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTT 162413 |||||| ||||| | || || || || |||||||||| |||||||||||||| || || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 162414 CTACACCAAGAATATCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCA 162473 |||||| || ||||| || || || || ||| ||||||| ||| |||| | ||||| Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 162474 ACCGCATGAGAACTTTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAAT 162533 || ||||| ||| || ||||||||||||| ||||| || | || ||||| || | ||| Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT-TTAAT 8269531 Query 162534 GG 162535 || Sbjct 8269530 GG 8269529 Score = 131 bits (144), Expect = 2e-25 Identities = 206/290 (71%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 161545 GATCGTTTCGTTTTTGTTGGCTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCT 161604 || || ||||||||||| || |||||||| || | || ||||| ||| ||| | ||| Sbjct 8270397 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8270338 Query 161605 ATTGGCGGTTGGCTTACTGGCACGACTTTCGCTACGAGCTGGTATACCCATGGACTCGCT 161664 | || |||||| | || ||||| || || | || ||||||||||||||| | || Sbjct 8270337 TTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 8270278 Query 161665 AGTTCCTATCTTG-AGGGTGCAAATTTTCTTACAGCGGCAGTTAGCACTCCAGCTGACGC 161723 ||||||||| | | ||| ||||| || | | || || |||||| ||||| || | Sbjct 8270277 AGTTCCTATTTGGAAGGCTGCAACTTCT-TAACCGCCGCAGTTTCGACTCCTACTAATAG 8270219 Query 161724 TATGGGTCATTCTCTTCTTCTT-CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGT 161782 | | | |||||| || || || || ||||||| ||| || ||||| ||||| | | Sbjct 8270218 TTTAGCGCATTCT-TTGTTGTTACTATGGGGTCTTGAAGCACAAGGAGATTTTACTCGCT 8270160 Query 161783 GGATCCAACTTGGGGGACTCTGGAATTTTGTGGCGCTCCACGGGGCTTTC 161832 || ||| | || || || |||| |||||| || ||||||| |||||| Sbjct 8270159 GGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCACGGTGCTTTC 8270110 Score = 114 bits (126), Expect = 1e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 160975 CTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTTGC 161034 ||||| |||||||| ||||| || |||| || ||||| || | ||||| |||||| Sbjct 4029979 CTTGATGCTGCTGAAGAAGCTGGGCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGC 4029920 Query 161035 TCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTCCTG 161094 ||| | ||| |||| || ||| | ||| || || || || || || ||| || ||| Sbjct 4029919 TCTTCCTGTACTGGGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTG 4029860 Query 161095 GATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCCCACTTCTGAT 161154 |||||||||||| ||| | ||| ||||| || || || | ||||||||| || |||| Sbjct 4029859 GATGATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAACAAGTGAT 4029800 Query 161155 GTAACTAT 161162 || ||||| Sbjct 4029799 GTTACTAT 4029792 Score = 102 bits (112), Expect = 9e-17 Identities = 147/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 160960 GATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGT 161019 ||||| |||| | ||||| || ||||| || || || |||| || || || || Sbjct 4033400 GATGACACATATATTCTTGATGCAGCTGAAGATGCTGGAATTGATCTCCCATATTCATGC 4033341 Query 161020 CGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCT 161079 | |||||| ||||||||||||||||||| || ||| |||| ||| || || || Sbjct 4033340 AGGGCTGGTTCTTGCTCTACTTGTGCTGGGAAAGTTGTCTCAGGTAGTGTTGACCAGTCA 4033281 Query 161080 GATC-AATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGC 161138 ||| || ||||| || | ||||||||| | || |||| | ||| || || || ||||| Sbjct 4033280 GATGGAAGCTTTCTTG-AGGATGATCAAATAGATGCAGGTTATGTTCTCACTTGTGTTGC 4033222 Query 161139 TTATCCCACTTCTGATGTAACTATT 161163 |||||| || |||||| ||| || Sbjct 4033221 TTATCCTACAAGTGATGTTACTGTT 4033197 >seq1 Length=28801852 Score = 192 bits (212), Expect = 6e-44 Identities = 216/288 (75%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 162248 TTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTC 162307 ||||| || ||||| |||||||| ||||| |||||| | || || || || | ||| Sbjct 21789393 TTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTT 21789334 Query 162308 TCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTG 162367 | |||| ||| || | || | | || || || || || || |||||||| ||||| | Sbjct 21789333 TATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCG 21789274 Query 162368 TATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATA 162427 | || ||||| || ||||||||||| |||||||||||||| || |||||||| || |||| Sbjct 21789273 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATA 21789214 Query 162428 TCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACT 162487 | || || || || ||| ||||||| ||| |||| | ||||| || ||||| ||| Sbjct 21789213 TTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 21789154 Query 162488 TTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 21789153 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 21789107 Score = 192 bits (212), Expect = 6e-44 Identities = 216/288 (75%), Gaps = 1/288 (0%) Strand=Plus/Minus Query 162248 TTGCTTTTAGTAATAAGCGTTGGTTGCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTC 162307 ||||| || ||||| |||||||| ||||| |||||| | || || || || | ||| Sbjct 21790580 TTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAACCGGTT 21790521 Query 162308 TCTGGACAAGTTCTATCGGTATTATTGGACTCGCTCTTAATCTTCGTGCTTACGACTTTG 162367 | |||| ||| || | || | | || || || || || || |||||||| ||||| | Sbjct 21790520 TATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCG 21790461 Query 162368 TATCTCAGGAGATTCGTGCAGCGGAGGATCCTGAATTTGAAACCTTCTACACCAAGAATA 162427 | || ||||| || ||||||||||| |||||||||||||| || |||||||| || |||| Sbjct 21790460 TTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATA 21790401 Query 162428 TCCTCTTGAATGAAGGTCTTCGTGCATGGTTGGCACCAGTTGATCAACCGCATGAGAACT 162487 | || || || || ||| ||||||| ||| |||| | ||||| || ||||| ||| Sbjct 21790400 TTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACC 21790341 Query 162488 TTGTATTCCCTGAGGAAGTTCTGCCTAGAGGTAACGCACTGTGAATGG 162535 || ||||||||||||| ||||| || | || ||||| || | ||||| Sbjct 21790340 TTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCT-TTAATGG 21790294 >seq20 Length=1106287 Score = 116 bits (128), Expect = 4e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 160603 CTGGTTCACTGCCCTTGGTGTTTCTACCATGGCATTCAATCTCAATGGTTTCAACTTCAA 160662 |||||||||||| | ||| || || ||||| ||||| | ||||||||||| ||||| Sbjct 251040 CTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTTCAA 250981 Query 160663 CCAGTCCATCTTGGACAACCAAGGACAAGTTCTGAACACTTGGGCAGACGTGCTTAACCG 160722 ||| || | | || | ||||| | || | || || ||||| || | |||| || Sbjct 250980 CCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAATCG 250921 Query 160723 CGCTGGTCTGGGCATGGAAGTCATGCACGAGCGTAACGCTCACAACTTCCCTCTCGACCT 160782 ||| || || |||||||| ||||| || ||||| ||||| ||||||||||| ||||| Sbjct 250920 TGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGACCT 250861 Query 160783 TGCTGCT 160789 |||||| Sbjct 250860 AGCTGCT 250854 >seq8 Length=22711823 Score = 113 bits (124), Expect = 5e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 160958 AGGATGATCAATATGTCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCT 161017 |||| || || || |||| || || ||||| |||||||| || ||| ||||| |||| Sbjct 18100508 AGGAAGACCAGTACATCCTCGATGCAGCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCT 18100449 Query 161018 GTCGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAAT 161077 | || |||||||||||||| || |||||||| ||| | | | |||| | || || || | Sbjct 18100448 GCCGCGCTGGTGCTTGCTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGT 18100389 Query 161078 CTGATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTG 161137 | ||| || ||||| ||||| ||||| | || | || | | | ||||| ||| || Sbjct 18100388 CAGATGGTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGCATTT 18100329 Query 161138 CTTATCCCACTTCTGAT 161154 | || || ||||| ||| Sbjct 18100328 CATACCCGACTTCAGAT 18100312 >seq7 Length=32205869 Score = 100 bits (110), Expect = 3e-16 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 161007 ACCCTACTCCTGTCGTGCTGGTGCTTGCTCTACTTGTGCTGGTAAGATTGAGAGTGGTAC 161066 ||||||||| ||||| |||||||| ||||||||||||||||| |||| | || | Sbjct 17163958 ACCCTACTCATGTCGGGCTGGTGCCTGCTCTACTTGTGCTGGGCAGATGGTTTCAGGCTC 17163899 Query 161067 TGTAGATCAATCTGATCAATCTTTCCTGGATGATGATCAACTTGAATCAGGATTTGTCCT 161126 || || ||||| ||| ||| ||||| |||||| | || | || ||| ||||| || Sbjct 17163898 CGTTGACCAATCAGATGGATCATTCCTTGATGATAAGCAGATGGAGAAAGGTTTTGTGCT 17163839 Query 161127 GACCTGCGTTGCTTATCCCACTTCTGAT 161154 || |||||||| ||||| || || ||| Sbjct 17163838 TACATGCGTTGCATATCCTACATCGGAT 17163811 Score = 89.7 bits (98), Expect = 6e-13 Identities = 123/172 (72%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 160973 TCCTTGACGCTGCTGATGAAGCAGGTGTTGACGGACCCTACTCCTGTCGTGCTGGTGCTT 161032 |||| ||| ||||||| || || || | || |||||||| || || |||||||| | Sbjct 17161960 TCCTCGACTCTGCTGAAGATGCCGGAATGGAGCTCCCCTACTCATGCCGCGCTGGTGCCT 17161901 Query 161033 GCTCTACTTGTGCTGGTAAGATTGAGAGTGGTACTGTAGATCAATCTGATCAATCTTTCC 161092 |||||||||| ||||| ||| | || |||| || ||||| ||| ||| |||| Sbjct 17161900 GCTCTACTTGCGCTGGCCTGATGGTTTCAGGCTCTGTTGACCAATCAGATGGATCATTCC 17161841 Query 161093 TGGATGATGATCAACTTGAATCAGGATTTGTCCTGACCTGCGTTGCTTATCC 161144 | |||||| | || | || ||| | |||||| || ||| |||| ||||| Sbjct 17161840 TTGATGATAACCAGATGGAGAAAGGTTATGTCCTTACATGCATTGCATATCC 17161789 >seq218 Length=51678 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 162273 GCATTTCTTTATGCTCTTCGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATTAT 162332 ||| ||||||||| | || || || || | ||| | |||| ||| || | || | | Sbjct 51241 GCAGTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 51300 Query 162333 TGGACTCGCTCTTAATCTTCGTGCTTACGACTTTGTATCTCAGGAGATTCGTGCAGCGGA 162392 || || || || || || |||||||| ||||| || || ||||| || ||||||||||| Sbjct 51301 CGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGA 51360 Query 162393 GGATCCTGAATTTGA 162407 |||||||||||||| Sbjct 51361 AGATCCTGAATTTGA 51375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 551342614183200