Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20sinensis_20[refseq_20GCF_5F000317415.1_202012-12-12] 4,844 sequences; 327,829,540 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq4844 715 0.0 seq2 367 1e-96 seq3 264 1e-65 seq20 158 1e-33 seq1 154 2e-32 seq8 120 3e-22 seq218 86.0 7e-12 >seq4844 Length=160129 Score = 715 bits (792), Expect = 0.0 Identities = 755/989 (76%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 160572 TTCTGCGAGTGGGTAACTTCTACAAACAATCGTCTTTACGTCGGTTGGTTCGGTGTGCTG 160631 ||||| | ||| ||||| || | || || |||||| | |||||||| ||||| || Sbjct 1523 TTCTGTAACTGGATAACTAGCACTGAAAACCGCCTTTACATTGGTTGGTTTGGTGTTTTG 1464 Query 160632 ATGATCCCAACTCTGTTGGCAGCAACCGTCTGC-TTTATTACTGCGTTCGTTGCTGCTCC 160690 |||||||| ||| | ||| | ||||| |||| ||||||| || ||| |||||||||| Sbjct 1463 ATGATCCCTACTTTATTGACCGCAACT-TCTGTATTTATTATCGCCTTCATTGCTGCTCC 1405 Query 160691 CCCCGTGGACATCGACGGTATCCGTGAACCCGTTGCTGGTTCACTGATGTATGGAAACAA 160750 || || || || |||||||| |||||||| ||| |||| || || | ||||||||||| Sbjct 1404 TCCAGTAGATATTGACGGTATTCGTGAACCTGTTTCTGGATCTCTACTTTATGGAAACAA 1345 Query 160751 CATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTACCCCAT 160810 || || |||||||| || ||||| |||| || || ||| | || || ||||| || Sbjct 1344 TATTATTTCTGGTGCGATTATTCCTACTTCTGCAGCTATAGGTTTGCATTTTTACCCGAT 1285 Query 160811 TTGGGAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGT 160870 |||||||| ||||| ||||||||||| | |||||||| |||||||| | || | || Sbjct 1284 ATGGGAAGCGGCATCCGTTGATGAATGGTTATACAATGGCGGTCCTTATGAGCTAATTGT 1225 Query 160871 ATTTCACTTCCTGATCGGCATCTTCTGCTACATGGGTCGCGAGTGGGAACTTTCCTACCG 160930 | |||||| | | || | || ||||||||||| |||||||||||| | ||| Sbjct 1224 TCTACACTTCTTACTTGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTTAGTTTCCG 1165 Query 160931 CCTCGGCATGCGCCCCTGGATCTGC-GTTGCATATTCTGCACCTGTTGCTGCTGCGAGTG 160989 || || ||||| || ||||| ||| ||||||||||| || |||||||| || |||| || Sbjct 1164 TCTGGGTATGCGTCCTTGGAT-TGCTGTTGCATATTCAGCTCCTGTTGCAGCAGCGACTG 1106 Query 160990 CAGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGGTATGCCCCTGGGTA 161049 | || ||| | |||| || |||||||||| ||| |||||||||||||| || || | Sbjct 1105 CTGTTTTCTTGATCTACCCAATCGGTCAAGGAAGTTTTTCTGATGGTATGCCTCTAGGAA 1046 Query 161050 TCTCTGGTACCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACC 161109 |||||||||| ||||| |||||| |||| |||||||| || ||||||||||| ||||||| Sbjct 1045 TCTCTGGTACTTTCAATTTCATGATTGTATTCCAGGCTGAGCACAACATCCTTATGCACC 986 Query 161110 CCTTCCACATGTTGGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCATG 161169 | ||||||||||| || || |||||||| ||||| || || || ||| || ||||||| Sbjct 985 CATTCCACATGTTAGGCGTAGCTGGTGTATTCGGCGGCTCCCTATTCAGTGCTATGCATG 926 Query 161170 GTTCACTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTATG 161229 |||| |||| || ||| || | | |||||||| || || || || || | Sbjct 925 GTTCCTTGGTAACCTCTAGTTTGATCAGGGAAACCACAGAAAATGAATCTGCTAATGCAG 866 Query 161230 GTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTCG 161289 |||||| || |||||||| ||||| || || || ||||| |||||||| ||||| || | Sbjct 865 GTTACAGATTCGGTCAAGAGGAAGAAACTTATAATATCGTAGCTGCTCACGGTTATTTTG 806 Query 161290 GTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCTCG 161349 | || ||||||||||||| ||| |||||||| || ||||| || || |||||||| | Sbjct 805 GCCGATTGATCTTCCAATATGCTAGTTTCAACAATTCTCGTTCTTTACATTTCTTCCTGG 746 Query 161350 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCA 161409 | || |||||||| || ||||||||||||||||| | ||| | ||| ||||| |||| Sbjct 745 CTGCTTGGCCTGTAGTAGGTATCTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCA 686 Query 161410 ACCTGAACGGATTCAACTTCAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACA 161469 || | || || ||||| |||||||| || | | ||| |||| || || | || | Sbjct 685 ACTTAAATGGTTTCAATTTCAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 626 Query 161470 CCTGGGCTGACGTTCTGAATCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATG 161529 |||||||||| || | |||||||||||||||||||||||||| ||||| || ||||||| Sbjct 625 CCTGGGCTGATATTATTAATCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 566 Query 161530 CTCACAACTTCCCTCTGGATCTCGCTGCT 161558 |||| ||||||||||| || || |||||| Sbjct 565 CTCATAACTTCCCTCTAGACCTAGCTGCT 537 Score = 533 bits (590), Expect = 2e-146 Identities = 715/991 (72%), Gaps = 8/991 (1%) Strand=Plus/Plus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || || || ||||| ||||||||||| || | || ||||| ||| ||| | || Sbjct 35865 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 35924 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| | || || ||||| ||||| || ||||| ||||| || | || Sbjct 35925 TTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCATGGTATACCCATGGATTAGCC 35984 Query 164037 TCTAGTTACC--TTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 |||| | ||| ||| ||| || ||| | || || || || || || |||||| | Sbjct 35985 ---AGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTGCTAA 36040 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | |||||| | | |||| ||||||||||| | || || || || | | | Sbjct 36041 TAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGAGATTTTACTCG 36100 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTCGCTCTGAT 164212 ||||| ||| | || || || ||| ||||||| || | ||||| |||||| || || Sbjct 36101 CTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTCTACACGGTGCTTTCGGACTAAT 36160 Query 164213 CGGTTTCATGCTTCGGCAGTTTGAAATTGCACGTCTTGTAGGTATCCGTCCGTACAATGC 164272 ||||||||| | || || |||||| |||| || ||| | || || || ||||| Sbjct 36161 AGGTTTCATGTTACGTCAATTTGAACTTGCTCGCTCTGTTCAATTGCGACCTTATAATGC 36220 Query 164273 TATTGCGTTCTCTGGTCCGATTGCTGTCTTTGTCAGCGTTTTCCTTATGTACCCTCTCGG 164332 || || ||||||| ||| |||||||| ||||| || ||||| || || || || || Sbjct 36221 AATAGCATTCTCTGCTCCAATTGCTGTTTTTGTTTCTGTATTCCTGATTTATCCACTAGG 36280 Query 164333 GCAATCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCTT 164392 || ||| ||||||||||||| || ||||| || |||||||| || ||||| || | Sbjct 36281 TCAGTCTGGTTGGTTCTTTGCGCCTAGTTTTGGTGTAGCGGCGATATTTCGATTCATCCT 36340 Query 164393 GTTCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGG 164452 || ||||||| || ||||| |||||| | |||||||| ||||||||||| ||||| || Sbjct 36341 TTTTTTCCAAGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGG 36400 Query 164453 CATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTT 164512 | | || | |||||| || ||||| |||||||| ||||||||||| |||||||| || Sbjct 36401 TGTATTGGGCGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATT 36460 Query 164513 TGAAGATGGTGAACAATCAAATACTTTCAAGGCATTCGAGCCTACTCAAGAGGAAGAGAC 164572 |||||||||||| |||| || ||| || || | || || |||| ||||| || Sbjct 36461 TGAAGATGGTGATGGTGCAAACACATTCCGTGCTTTTAACCCAACGCAAGCCGAAGAAAC 36520 Query 164573 TTACTCGATGGTCACTGCCAACCGCTTCTGGTCTCAGATTTTTGGTATTGCTTTCAGCAA 164632 || ||||||||||| || |||||||| |||||||| || ||||| ||||||| ||| Sbjct 36521 CTATTCGATGGTCACCGCTAACCGCTTTTGGTCTCAAATCTTTGGGGTTGCTTTTTCCAA 36580 Query 164633 TAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTC 164692 ||| |||||||| || ||||||||| | ||||| || || | || | |||| ||| | Sbjct 36581 TAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGC 36640 Query 164693 TATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGAT 164752 | |||| | |||| || || || || || ||||||||||| || || || ||||| || Sbjct 36641 TCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAAT 36700 Query 164753 TAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGAAGAACATCCTCCTCAATGA 164812 | ||||| || ||||||||||||||||| ||||| || || || || || | || || Sbjct 36701 CCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAAAAAATATTCTTTTAAACGA 36760 Query 164813 AGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACGAATCGTTTGTATTTCCAGA 164872 || | ||||| |||||||| | ||| ||||| || ||| || |||| || || Sbjct 36761 GGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGA 36820 Query 164873 GGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 ||| ||||| || | || ||||| || ||| Sbjct 36821 GGAGGTTCTACCCCGTGGAAACGCTCTTTAA 36851 >seq2 Length=30838379 Score = 367 bits (406), Expect = 1e-96 Identities = 416/555 (75%), Gaps = 2/555 (0%) Strand=Plus/Minus Query 160599 AATCGTCTTTACGTCGGTTGGTTCGGTGTGCTGATGATCCCAACTCTGTTGGCAGCAACC 160658 || || |||||| | |||||||| ||||| |||||||||| ||| | ||| | ||||| Sbjct 6214840 AACCGCCTTTACATTGGTTGGTTTGGTGTTTTGATGATCCCTACTTTATTGACCGCAACT 6214781 Query 160659 GTCTGC-TTTATTACTGCGTTCGTTGCTGCTCCCCCCGTGGACATCGACGGTATCCGTGA 160717 |||| ||||||| || ||| ||| |||||| || || || || |||||||| ||||| Sbjct 6214780 -TCTGTATTTATTATCGCCTTCATTGTTGCTCCTCCAGTAGATATTGACGGTATTCGTGA 6214722 Query 160718 ACCCGTTGCTGGTTCACTGATGTATGGAAACAACATCATCTCTGGTGCAGTTGTTCCTTC 160777 || ||| ||| || || | ||||||||||| || || |||||||| || ||||| | Sbjct 6214721 ACTTGTTTCTGAATCTCTACTTTATGGAAACAATATTATTTCTGGTGCGATTATTCCTAC 6214662 Query 160778 TTCCAACGCAATTGGTCTTCACTTCTACCCCATTTGGGAAGCTGCATCTCTTGATGAATG 160837 ||| || || ||| | || || ||||| || |||||||| ||||| |||||||||| Sbjct 6214661 TTCTGCAGCTATAGGTTTGCATTTTTACCCGATATGGGAAGCGGCATCCGTTGATGAATG 6214602 Query 160838 GCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTTCACTTCCTGATCGGCATCTTCTG 160897 | | |||||||| |||||||| | || | || | |||||| | | || | || Sbjct 6214601 GTTATACAATGGCGGTCCTTATGAGCTAATTGTTCTACACTTCTTACTTGGTGTAGCTTG 6214542 Query 160898 CTACATGGGTCGCGAGTGGGAACTTTCCTACCGCCTCGGCATGCGCCCCTGGATCTGCGT 160957 ||||||||||| |||||||||||| | ||| | || |||| || ||||| || Sbjct 6214541 TTACATGGGTCGTGAGTGGGAACTTAGTTTCCGTATGGGTATGCATCCTTGGATTGTTGT 6214482 Query 160958 TGCATATTCTGCACCTGTTGCTGCTGCGAGTGCAGTATTCCTCGTCTATCCTTTCGGTCA 161017 ||||||||| || | |||||| || |||| | | || ||| | |||| || | ||||| Sbjct 6214481 TGCATATTCAGCTCTTGTTGCAGCAGCGACTACTGTTTTCTTGATCTACCCAATTGGTCA 6214422 Query 161018 AGGTTCTTTCTCTGATGGTATGCCCCTGGGTATCTCTGGTACCTTCAACTTCATGCTTGT 161077 ||| ||| |||||||||||||| || || ||||||||||| |||||||||||| |||| Sbjct 6214421 AGGAAGTTTTTCTGATGGTATGCCTCTAGGAATCTCTGGTACTTTCAACTTCATGATTGT 6214362 Query 161078 CTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCCACATGTTGGGTGTTGCTGGTGT 161137 || |||| || ||||||||||| |||||||| ||||||||||| || | ||| |||| Sbjct 6214361 ATTATAGGCTGAGCACAACATCCTTATGCACCCATTCCACATGTTAGGCATAGCTTGTGT 6214302 Query 161138 CTTCGGTGGTTCTCT 161152 || || || || || Sbjct 6214301 ATTTGGCGGCTCCCT 6214287 >seq3 Length=28715784 Score = 264 bits (292), Expect = 1e-65 Identities = 380/538 (71%), Gaps = 36/538 (7%) Strand=Plus/Minus Query 164402 AGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCATCCTTGG 164461 ||| || ||||| |||||| | |||||||| ||||||||||| ||||| || | | || Sbjct 8270069 AGGGTTTCATAATTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCGGTGTATTGGG 8270010 Query 164462 TGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTGAAGATGG 164521 | |||||| || ||||| |||||||| ||||||||||| |||||||| ||||||||||| Sbjct 8270009 CGCTGCTCTGCTATGTGCCATTCATGGCGCTACCGTAGAAAATACTTTATTTGAAGATGG 8269950 Query 164522 TGAA----CAATCAAAT-AC-----TTT---------CAAGGC--------ATTCG---- 164550 ||| ||| || || || ||| |||| | |||| Sbjct 8269949 TGATGGTGCAAACACATTACGTGTTTTTAACCCAACGCAAGCCGAAAACACATTCCGTGC 8269890 Query 164551 -----AGCCTACTCAAGAGGAAGAGACTTACTCGATGGTCACTGCCAACCGCTTCTGGTC 164605 | || || |||| ||||| || || ||||||||||| || |||||||| ||||| Sbjct 8269889 TTTTAACCCAACGCAAGCCGAAGAAACCTATTCGATGGTCACCGCTAACCGCTTTTGGTC 8269830 Query 164606 TCAGATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTTTGT 164665 ||| || ||||| ||||||| |||||| |||||||| || ||||||||| | ||||| Sbjct 8269829 TCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGT 8269770 Query 164666 TCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCTTCG 164725 || || | || | |||| ||| || |||| | |||| || || | || || || Sbjct 8269769 ACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCAAAACCTACG 8269710 Query 164726 TGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGACGTT 164785 ||||||||| || | || || || || | ||||| || ||||||||||||||||| || Sbjct 8269709 TGCTTATGACTTCATTTCCCAAGAAATCTGTGCAGCGGAAGATCCTGAATTTGAGACTTT 8269650 Query 164786 CTATACGAAGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCA 164845 ||| || || || || || | || || || | ||||| |||||||| | ||| || Sbjct 8269649 CTACACAAAAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCA 8269590 Query 164846 GCCACACGAATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 ||| || ||| || |||| || ||||| ||||| || | || ||||| || ||| Sbjct 8269589 GCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 8269532 Score = 96.9 bits (106), Expect = 4e-15 Identities = 199/292 (68%), Gaps = 8/292 (3%) Strand=Plus/Minus Query 163917 GATCGCTTTGTCTTTGTGGGTTGGTCTGGATTACTTCTTTTTCCCACTGCTTATCTTGCA 163976 || || || || ||||| ||||||||||| || | || ||||| ||| ||| | || Sbjct 8270397 GACCGATTCGTTTTTGTAGGTTGGTCTGGCCTATTGCTCTTTCCTTGTGCCTATTTCGCT 8270338 Query 163977 ATTGGTGGCTGGCTTACTGGTACAACGTTTGTTACCAGTTGGTACACCCACGGTCTCGCG 164036 | || || ||| | || || ||||| ||||| || ||||| ||||| || | | Sbjct 8270337 TTAGGGGGTTGGTTCACAGGCACAACCTTTGTAACTTCATGGTATACCCATGGATTAG-- 8270280 Query 164037 TCTAGTTAC--CTTG--AGGGTGCTAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGA 164092 | |||| | ||| ||| ||| || ||| | || || || || || || ||| || | Sbjct 8270279 -CCAGTTCCTATTTGGAAGGCTGC-AACTTCTTAACCGCCGCAGTTTCGACTCCTACTAA 8270222 Query 164093 TGCTATGGGTCATTCTCTTCTTCTACTTTGGGGTCCTGAGTCTCAGGGGGACTTCATTAG 164152 | | | | |||||| | | |||| ||||||| ||| | || || || || | | | Sbjct 8270221 TAGTTTAGCGCATTCTTTGTTGTTACTATGGGGTCTTGAAGCACAAGGAGATTTTACTCG 8270162 Query 164153 GTGGTGCCAACTTGGGGGACTCTGGGCTTTTGTGGCGTTCCACGGATCTTTC 164204 ||||| ||| | || || || ||| ||||||| || |||||||| ||||| Sbjct 8270161 CTGGTGTCAATTAGGCGGTCTTTGGACTTTTGTTGCTTTCCACGGTGCTTTC 8270110 >seq20 Length=1106287 Score = 158 bits (174), Expect = 1e-33 Identities = 159/207 (77%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 161369 TATCTGGTTCACTGCACTTGGTGTCTCCACCATGGCATTCAACCTGAACGGATTCAACTT 161428 || |||||||||||| | ||| | ||| ||||| |||||| | || || ||||| || Sbjct 251043 TAACTGGTTCACTGCTTTAGGTATTAGCACTATGGCTTTCAACTTAAATGGTTTCAATTT 250984 Query 161429 CAACCAGTCCATCATGGATGGTCAGGGCAAAGTCCTGAACACCTGGGCTGACGTTCTGAA 161488 |||||| || | | ||| |||| || || | || ||||||||||| || | || Sbjct 250983 CAACCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACCTGGGCTGATATTATTAA 250924 Query 161489 TCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACTTCCCTCTGGA 161548 |||||||||||||||||||||||| ||||| || ||||||||||| ||||||||||| || Sbjct 250923 TCGTGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCTCATAACTTCCCTCTAGA 250864 Query 161549 TCTCGCTGCTGCTGAGTCCACTCCTGT 161575 || |||||| ||| || || |||| Sbjct 250863 CCTAGCTGCTATTGAAGCCCCTGCTGT 250837 >seq1 Length=28801852 Score = 154 bits (170), Expect = 2e-32 Identities = 208/290 (72%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 164614 TTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCA 164673 |||| ||||| | |||||| |||||||| || || |||||| | ||||| || || | Sbjct 21789399 TTGGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAA 21789340 Query 164674 TGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATG 164733 || | |||| ||| || |||| | |||| || || || || || |||||||||| Sbjct 21789339 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATG 21789280 Query 164734 ATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGA 164793 | || || || ||||| || | ||||| || ||||||||||||||||| ||||| || | Sbjct 21789279 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAA 21789220 Query 164794 AGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACG 164853 | || || || | || || || | ||||| |||||||| | ||| ||||| || | Sbjct 21789219 AAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 21789160 Query 164854 AATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 || || |||| || ||||| ||||| || | || ||||| || ||| Sbjct 21789159 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 21789110 Score = 154 bits (170), Expect = 2e-32 Identities = 208/290 (72%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 164614 TTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGCTCTTTGTTCCTGTCA 164673 |||| ||||| | |||||| |||||||| || || |||||| | ||||| || || | Sbjct 21790586 TTGGGGTTGCTATTTCCAATAAACGTTGGTTACATTTTTTTATGTTATTTGTACCAGTAA 21790527 Query 164674 TGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTCAATCTTCGTGCTTATG 164733 || | |||| ||| || |||| | |||| || || || || || |||||||||| Sbjct 21790526 CCGGTTTATGGATGAGTGCTCTTGGAGTAGTCGGCCTAGCCCTGAACCTACGTGCTTATG 21790467 Query 164734 ATTTTGTGTCTCAGGAGATTAGAGCAGCAGAGGATCCTGAATTTGAGACGTTCTATACGA 164793 | || || || ||||| || | ||||| || ||||||||||||||||| ||||| || | Sbjct 21790466 ACTTCGTTTCCCAGGAAATCCGTGCAGCGGAAGATCCTGAATTTGAGACTTTCTACACAA 21790407 Query 164794 AGAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAGTAGACCAGCCACACG 164853 | || || || | || || || | ||||| |||||||| | ||| ||||| || | Sbjct 21790406 AAAATATTCTTTTAAACGAGGGTATTCGTGCTTGGATGGCGGCTCAAGATCAGCCTCATG 21790347 Query 164854 AATCGTTTGTATTTCCAGAGGAAGTTCTTCCGAGAGGTAACGCACTCTAA 164903 || || |||| || ||||| ||||| || | || ||||| || ||| Sbjct 21790346 AAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA 21790297 Score = 111 bits (122), Expect = 2e-19 Identities = 213/315 (68%), Gaps = 18/315 (6%) Strand=Plus/Minus Query 161056 GTACCTTCAACTTCATGCTTGTCTTCCAGGCAGAACACAACATCCTGATGCACCCCTTCC 161115 |||| |||||||||||| |||| |||||||| || |||| ||| || |||| | |||| Sbjct 20504928 GTACTTTCAACTTCATGATTGTATTCCAGGCTGAGCACAGCATTCTTGTGCATTCATTCC 20504869 Query 161116 ACATGTT-------GGGTGTTGCTGGTGTCTTCGGTGGTTCTCTGTTCTCCGCAATGCAT 161168 ||||||| || | ||||||| || || ||||| || ||||| Sbjct 20504868 ACATGTTATGACTAAGGCTTAGCTGGTGCGTTTGGCGGTTCCCT----------ATGCAC 20504819 Query 161169 GGTTCACTGGTTACTTCTTCCCTGGTTCGTGAAACCACTGAGAACGAGTCCCAGAACTAT 161228 |||| |||| || ||| || | || |||||||| || || || || | || | Sbjct 20504818 GGTTACTTGGTAACCTCTAGTTTGATCCGGGAAACCACAGAAAATGAATCTCCCAAGGAA 20504759 Query 161229 GGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGTCGCTGCTCATGGTTACTTC 161288 | |||| ||||||| ||| || || || ||| | || || ||||||||| ||| || Sbjct 20504758 AGATACAGATTTGGTCCAGAGGAGGAAACTTACGATATTGTATCTGCTCATGTTTATTTT 20504699 Query 161289 GGTCGCCTGAT-CTTCCAATACGCTTCCTTCAACAACTCCCGTTCGTTGCACTTCTTCCT 161347 || |||| ||||| ||| ||| ||| ||| || | ||| || || |||||||| Sbjct 20504698 GGCTTATTGATACTTCCGATATGCTGGTTTCCGCAATTCTCATTCTTTACATTTCTTCCT 20504639 Query 161348 CGCAGCATGGCCTGT 161362 | || ||||||| Sbjct 20504638 AGATGCTGGGCCTGT 20504624 >seq8 Length=22711823 Score = 120 bits (132), Expect = 3e-22 Identities = 142/190 (75%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 164336 ATCTAGTTGGTTCTTTGCCCCCTCGTTTGGG-GTCGCGGCGATCTTCAGATTCCTCTTGT 164394 |||| |||| ||||||| || |||||| || || | | |||| || | ||| || | | Sbjct 5468302 ATCTTGTTGATTCTTTGAGCC-TCGTTTTGGTGTAGTGACGATATTTCGGTTCATCCTTT 5468360 Query 164395 TCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCA 164454 | ||||||| | |||| | |||| | || ||||| ||||||||||| ||||| || Sbjct 5468361 TTTTCCAAGGGTCTTATAAGTAGACATTAAATCCCTTTCATATGATGGGAGTTGCTGGTG 5468420 Query 164455 TCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTG 164514 | | |||| || || || |||||||||||||| |||| |||| |||||||| |||| Sbjct 5468421 TATTAGGTGATGTTCAGCTATGTGCTATTCATGGCACTACTATAGAAAATACTTTATTTG 5468480 Query 164515 AAGATGGTGA 164524 |||||| ||| Sbjct 5468481 AAGATGCTGA 5468490 Score = 105 bits (116), Expect = 7e-18 Identities = 140/193 (73%), Gaps = 5/193 (3%) Strand=Plus/Minus Query 164337 TCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTC-TTGTT 164395 ||| ||| ||||||||| || ||||| || | ||| || || | ||| || || || Sbjct 6304519 TCTTGTTAGTTCTTTGCGCCTAGTTTTGGTGTAGTGGCAATATTACGGTTCATCCTTCTT 6304460 Query 164396 CCTC----CAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAG 164451 | | ||||| | |||| |||||| | |||||||| ||||||||||| ||||| Sbjct 6304459 CTTTTTTTCAAGGGTCTTATAAGTGGACATTGAACCCCTTTCATATGATGGGAGTTGCCT 6304400 Query 164452 GCATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGT 164511 | | | || | |||||| || |||||||||||| | ||||| |||| ||||||| | Sbjct 6304399 GTGTATTGGGCGCTGCTCTGCTATGTGCTATTCATAGCGCTACTATAGAAAATACTTAAT 6304340 Query 164512 TTGAAGATGGTGA 164524 |||| |||| ||| Sbjct 6304339 TTGAGGATGATGA 6304327 Score = 93.3 bits (102), Expect = 5e-14 Identities = 139/191 (73%), Gaps = 6/191 (3%) Strand=Plus/Plus Query 164337 TCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTCT-TGTT 164395 ||| |||||||||| | || ||||| || | |||||| || |||| ||| | || Sbjct 5452470 TCTGGTTGGTTCTTCGTGCCTAGTTTTGGTGTAGTGGCGATATTTCCATTCATCTCTTTT 5452529 Query 164396 CCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTG-CAG-GC 164453 ||||||| || |||| | |||| | |||| ||| |||||||||| || | ||| | Sbjct 5452530 TTTCCAAGGGTTTTATAATTAGACATTAAACCTCTTTCATATGATGGA-GTCGTCAGTGT 5452588 Query 164454 ATCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTT 164513 || || ||| || | | || ||||||||||||||||||| ||||| || | || || Sbjct 5452589 AT--TTCGTGTTGTTTTGCTATGTGCTATTCATGGTGCTATTGTAGAAAAAAAATTAGTT 5452646 Query 164514 GAAGATGGTGA 164524 || |||||||| Sbjct 5452647 GATGATGGTGA 5452657 Score = 93.3 bits (102), Expect = 5e-14 Identities = 136/190 (72%), Gaps = 3/190 (2%) Strand=Plus/Minus Query 164337 TCTAGTTGGTTCTTTGCCCCCTCGTTTGGGGTCGCGGCGATCTTCAGATTCCTC--TTGT 164394 ||| |||||||||| | | ||||| || | |||||| || ||||| || || | Sbjct 6321417 TCTGGTTGGTTCTTCGTGCGTAGTTTTGGTGTAGTGGCGATATTTCGATTCATCCTTTTT 6321358 Query 164395 TCCTCCAAGGTTTCCATAACTGGACACTCAACCCCTTCCATATGATGGGTGTTGCAGGCA 164454 | ||||||| || ||| |||||| | || ||||| |||||||| | || | || Sbjct 6321357 TGTTCCAAGGGTTTTGTAATTGGACATTAAATCCCTTTCATATGATAGAGTTTTC-GGTG 6321299 Query 164455 TCCTTGGTGGTGCTCTTCTCTGTGCTATTCATGGTGCTACCGTAGAGAATACTTTGTTTG 164514 | || || || | | || ||||||||||||||||||| ||||| || | ||| ||| Sbjct 6321298 TATTTCATGTTGTTTTGCTATGTGCTATTCATGGTGCTATTGTAGAAAAAAATTTAGTTG 6321239 Query 164515 AAGATGGTGA 164524 |||||||||| Sbjct 6321238 AAGATGGTGA 6321229 >seq218 Length=51678 Score = 86.0 bits (94), Expect = 7e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 164645 GCACTTCTTTATGCTCTTTGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCAT 164704 ||| ||||||||| | ||||| || || | || | |||| ||| || |||| | | Sbjct 51241 GCAGTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGAGTAGT 51300 Query 164705 CGGTCTCGCACTCAATCTTCGTGCTTATGATTTTGTGTCTCAGGAGATTAGAGCAGCAGA 164764 ||| || || || || || ||||||||||| || || || ||||| || | ||||| || Sbjct 51301 CGGCCTAGCCCTGAACCTACGTGCTTATGACTTCGTTTCCCAGGAAATCCGTGCAGCGGA 51360 Query 164765 GGATCCTGAATTTGA 164779 |||||||||||||| Sbjct 51361 AGATCCTGAATTTGA 51375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559294132689600