Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= AAMG01000150.1
Length=138
Score E
Sequences producing significant alignments: (Bits) Value
seq155431 134 1e-29
seq159612 104 2e-20
>seq155431
Length=1149
Score = 134 bits (148), Expect = 1e-29
Identities = 104/124 (84%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74
|| ||||| ||||||||| |||||||||||||||||| | |||| ||||| ||||||
Sbjct 138 CCGTACGGCTACCTTGTTACGACTTCACCCCAGTCATTGACCACACCGTGGTCGGCGCCC 79
Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134
||| ||||| ||||||| ||||| ||||| | ||||||||||||||||||||||||
Sbjct 78 TCCTTGCGGTTAGGCTACCTGCTTCTGGTGCAATCAACTCCCATGGTGTGACGGGCGGTG 19
Query 135 TGTA 138
||||
Sbjct 18 TGTA 15
>seq159612
Length=999
Score = 104 bits (114), Expect = 2e-20
Identities = 96/122 (79%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 17 CTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTC 76
|||||| ||||||||| ||||||||||||||||| | || || | | || |||||
Sbjct 155 CTACGGCTACCTTGTTACGACTTCACCCCAGTCACGGGTCCCACCTTCGACGGCTCCCTC 96
Query 77 CCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTG 136
| ||||||| || ||| |||| | |||| ||||||||||||||||||||||||||
Sbjct 95 CAAAAGGTTAGGCCACCGGCTTCGGGTATAACCAACTCCCATGGTGTGACGGGCGGTGTG 36
Query 137 TA 138
||
Sbjct 35 TA 34
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 344827298880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |