Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0 01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters Query= AAMG01000150.1 Length=138 Score E Sequences producing significant alignments: (Bits) Value seq155431 134 1e-29 seq159612 104 2e-20 >seq155431 Length=1149 Score = 134 bits (148), Expect = 1e-29 Identities = 104/124 (84%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 15 CCCTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCC 74 || ||||| ||||||||| |||||||||||||||||| | |||| ||||| |||||| Sbjct 138 CCGTACGGCTACCTTGTTACGACTTCACCCCAGTCATTGACCACACCGTGGTCGGCGCCC 79 Query 75 TCCCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTG 134 ||| ||||| ||||||| ||||| ||||| | |||||||||||||||||||||||| Sbjct 78 TCCTTGCGGTTAGGCTACCTGCTTCTGGTGCAATCAACTCCCATGGTGTGACGGGCGGTG 19 Query 135 TGTA 138 |||| Sbjct 18 TGTA 15 >seq159612 Length=999 Score = 104 bits (114), Expect = 2e-20 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 17 CTACGGTTACCTTGTTTCGACTTCACCCCAGTCATGAATCACAAAGTGGTAAGCGCCCTC 76 |||||| ||||||||| ||||||||||||||||| | || || | | || ||||| Sbjct 155 CTACGGCTACCTTGTTACGACTTCACCCCAGTCACGGGTCCCACCTTCGACGGCTCCCTC 96 Query 77 CCGAAGGTTAAGCTACCTACTTCTTTTGCAACCCACTCCCATGGTGTGACGGGCGGTGTG 136 | ||||||| || ||| |||| | |||| |||||||||||||||||||||||||| Sbjct 95 CAAAAGGTTAGGCCACCGGCTTCGGGTATAACCAACTCCCATGGTGTGACGGGCGGTGTG 36 Query 137 TA 138 || Sbjct 35 TA 34 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344827298880