Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq130997 401 9e-110
seq118330 401 9e-110
>seq130997
Length=1587
Score = 401 bits (444), Expect = 9e-110
Identities = 245/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 916 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 859
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 858 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 799
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 798 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 739
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 738 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 679
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 678 GCCATAGTCCCTCTAA 663
>seq118330
Length=3206
Score = 401 bits (444), Expect = 9e-110
Identities = 245/256 (96%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 2996 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2939
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2938 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 2879
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2878 CCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 2819
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2818 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCG 2759
Query 241 GCCAT-CTCCCTCGAA 255
||||| |||||| ||
Sbjct 2758 GCCATAGTCCCTCTAA 2743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 750262614920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |