Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq164654 437 3e-120
seq193326 342 2e-91
seq213222 338 2e-90
seq152413 336 8e-90
seq206697 334 3e-89
seq198914 315 3e-83
seq163170 259 2e-66
seq208757 194 6e-47
seq237902 181 4e-43
seq212791 161 4e-37
seq157969 158 4e-36
seq233390 138 4e-30
seq170992 120 1e-24
seq181327 114 5e-23
seq226853 75.2 4e-11
>seq164654
Length=1436
Score = 437 bits (484), Expect = 3e-120
Identities = 458/591 (77%), Gaps = 18/591 (3%)
Strand=Plus/Plus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| |||||||||| |||||| ||||| || ||| | | | || |||||||||
Sbjct 666 TCGACCACGGAGCTTAG-CCCCCGTAGTCTGACTCCCG-GATATGCGTTTGCGGCATTCG 723
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120
|||||| ||| |||||||| |||||| | ||||||| |||| |||||||||||| |||
Sbjct 724 AAGTTTGATTGGGTTCGGTAACCTTGTGAGGCCCCTAGCCCATTCAGTGCTCTACCACCG 783
Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180
| || || ||| ||| |||||| |||||||||||||| |||||||||||| |
Sbjct 784 CAACGATTCATCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACGAGCTATCACGAAAT 843
Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240
|||||| ||||||||||||||| ||||| |||||| |||||||||| || ||||
Sbjct 844 TTGATTAGCCTTTCACCCCTATGCACAGCTCATCCAAATGGTTTTCAACCCAAACTGGTT 903
Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300
||| |||||||| ||| |||||| ||||||| |||| ||||| |||||||| |||||||
Sbjct 904 CGGCCCTCCACGTGGTGTTACCCACGCTTCAGCCTGGCCATGCATAGATCATCTCGCTTC 963
Query 301 GGGTCTTGAT-CGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359
||| || | ||| | |||||||||| ||||||||||||||| ||||| | |
Sbjct 964 ACGTCCGAATACCACAGACT-AAACGCCCTATTAGGACTCGCTTTCGCTTCGGCT--CAC 1020
Query 360 ACACGGGTTAACCTCGC--GACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACG 417
| | ||||||| || | ||| ||| || |||||||| | |||||||||||
Sbjct 1021 TTATCGTTTAACCTTGCCTGTGACA---TTCACTAGCCGGCTCATTATGCAAAAGGCACG 1077
Query 418 CCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAG 477
| |||| || | | | ||| | |||| || | ||||| ||||| ||||||||
Sbjct 1078 CGGTCA----GT--CAGGACGAACCTTGACCTCCCACTGCTTGTAAGCACACGGTTTCAG 1131
Query 478 GTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGC 536
||||||||||||||||| | | ||||| ||||||||||||||||||||||||| || | |
Sbjct 1132 GTACTATTTCACTCCCCTCACCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCAC 1191
Query 537 TATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587
|||||||||||| ||||||||||| |||| ||| |||||||| ||||||||
Sbjct 1192 TATCGGTCACCAGGGAGTATTTAGCCTTACCGGATGGTCCCGGCAGATTCA 1242
>seq193326
Length=1315
Score = 342 bits (378), Expect = 2e-91
Identities = 402/534 (75%), Gaps = 11/534 (2%)
Strand=Plus/Minus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| ||| |||||| |||||||| |||| || ||||||| || || ||||||||
Sbjct 530 TCGACGACGAAGCTTA-TCCCCCGCCGTCTGACTGCCGCGCATTCCATTGATGGCATTCG 472
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120
|||||||||| ||| |||| | || | ||||||| |||||||| |||||||| ||
Sbjct 471 AAGTTTGGTTGGATTCAGTAACCCGGTAAGGCCCCTAGTCCATCCAGCGCTCTACCACCA 412
Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180
| || ||||||||||| |||||| ||||||| |||||| |||||| ||| | |
Sbjct 411 TCATGATCCACGCGACGCTATCCCTAAAGATATTTCGGAGAGAACGAGCTATAACGGAAT 352
Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240
||||||||||||||||||||| ||||| |||||| | |||||||||| | ||||
Sbjct 351 TTGATTGGCCTTTCACCCCTAGGCACAGCTCATCCAAGCTGTTTTCAACCAACACTGGTT 292
Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300
||| ||||||| ||| |||||| | |||| |||| ||||| ||||||| ||||||
Sbjct 291 CGGACCTCCACCTGGTGTTACCCAGGTTTCATCCTGGCCATGCCTAGATCATCCCGCTTC 232
Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360
| || | | || |||||| |||||| ||| |||||||||||||||||||| | ||
Sbjct 231 GCGTGTACTCCCAGCGACTCATTCGCCCTTTTCAGACTCGCTTTCGCTACGGCT-CTGCA 173
Query 361 CACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCG 420
| | || ||| || | | | |||| || |||||||| | |||||||||||| |
Sbjct 172 AATTGCTTCGCCTTGCCCCTGAGAG-TAACTAGCCGGCTCATTATGCAAAAGGCACGCGG 114
Query 421 TCA--CCT--GGTACCTAA--AAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTT 474
||| | | | || || |||| | |||| || | |||||| || | |||||
Sbjct 113 TCAGGCATTCCGACCCGAAGTCCGGCA-TAGCCCTCCCACTGCTTGTAGACATACGGTTT 55
Query 475 CAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTA 527
|||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 54 CAGGTACTATTTCACTCCCCTAACAGGGGTTCTTTTCACCTTTCCCTCACGGTA 1
>seq213222
Length=619
Score = 338 bits (374), Expect = 2e-90
Identities = 397/529 (75%), Gaps = 16/529 (3%)
Strand=Plus/Minus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| ||||| |||| | |||| ||||| | ||| ||||| || ||| |||||
Sbjct 515 TCGACCACGGACCTTAG-CACCCGTAGTCTGTCTGCCAGGCTCTGACCCGACGGTATTCG 457
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120
|||||||||| || |||||| | |||||||| ||||||||||||||||| |||
Sbjct 456 GAGTTTGGTTAGGTTTGGTAAGGATCGCTCCCCCCTAGCCCATCCAGTGCTCTACCCCCG 397
Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180
||| | |||||| |||||||| |||||| |||||||||||||| | |||
Sbjct 396 TCGGTGAACGCCTGACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTATTTCCGAGT 337
Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240
||||||||||||||||||||| |||||| |||||| | |||||||| | | ||||
Sbjct 336 TTGATTGGCCTTTCACCCCTAGCCACAGATCATCCAGTACCTTTTCAACGGTAATTGGTT 277
Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300
|||||||||| |||| ||||||| |||||||||| |||||| |||||||| | |||
Sbjct 276 CGGTCCTCCAGCCGGTGTTACCCGACCTTCAACCTGTCCATGGCTAGATCACCCGGTTTC 217
Query 301 GGGTCTTGATCGTGC-CACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCC 359
||||| | ||| | | ||||| |||||||||| ||||||||||||||||| || | ||
Sbjct 216 GGGTC-TAATCCTACGAACTCAAGCGCCCTATTCAGACTCGCTTTCGCTACGCCTCCGCC 158
Query 360 ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCC 419
||| |||| || || | || | || |||| | | |||| | ||| ||| ||||
Sbjct 157 TATCGGCTTAAGCTTGC-TCGTAAGACTAAGTCGCTGACCCATTATACAAGAGGTACGCG 99
Query 420 GTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT 479
||||| || || || | | ||||| || | ||||| ||| ||||||||||
Sbjct 98 GTCAC--GG---CTCAAGG------CCGCTCCCACTGCTTGTAAGCATTCGGTTTCAGGT 50
Query 480 ACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTA 527
|||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct 49 TCTATTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTCACGGTA 1
>seq152413
Length=432
Score = 336 bits (372), Expect = 8e-90
Identities = 335/429 (78%), Gaps = 10/429 (2%)
Strand=Plus/Minus
Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193
|||||| |||||||| |||||||||||||||||||||| | ||||||||||||||||
Sbjct 427 GACGCTATACCTAAATATATTTCGGGGAGAACCAGCTATCTCCGAGTTTGATTGGCCTTT 368
Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253
|||||||| |||||| |||||| |||||||||||| ||||||| |||||||
Sbjct 367 CACCCCTACCCACAGCTCATCCGGGAAGTTTTCAACCTTCTGCGGTTCGGGCCTCCACTA 308
Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313
|| ||||| | |||| |||| |||| | ||||||||| | ||||||||| | |
Sbjct 307 CGTTTTACCGTAGTTTCACCCTGGCCATAGGTAGATCACTCGGTTTCGGGTCTAAAGCCG 248
Query 314 GCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC-CCCACACGGGTTAACC 372
|| ||| |||||||||||||||||||||||||||||||||| || | |||| ||||||
Sbjct 247 GCAACT-GGACGCCCTATTCGGACTCGCTTTCGCTACGGCTACACCTAAACGGCTTAACC 189
Query 373 TCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACC 432
| || | | || ||||||| | |||||| | ||||||| |||| |||||| | |
Sbjct 188 TTGCTGC-CGACCTTAACTCGCGGACTCATTATGCAAAAGGTACGCAGTCACCCATTGCG 130
Query 433 T---AAAAGGCACTTCA----GCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATT 485
| ||| ||| || ||||| || ||||||||| | |||||||||| |||||
Sbjct 129 TGTCCGAAGACACGCCATAGGGCTCCCACTTTTTGTAGGCAAACGGTTTCAGGTTCTATT 70
Query 486 TCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545
||||||||| || ||||| ||||||||||||||||||||||||| || | |||||||||
Sbjct 69 TCACTCCCCTCCCGGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCG 10
Query 546 CCAAGGAGT 554
||| | |||
Sbjct 9 CCAGGTAGT 1
>seq206697
Length=2363
Score = 334 bits (370), Expect = 3e-89
Identities = 402/540 (74%), Gaps = 16/540 (3%)
Strand=Plus/Plus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTC 112
|| ||||||||||||||| || |||| | | | |||||||| |||||||||||||
Sbjct 799 GGTATTCGGAGTTTGGTTAGGTTTGGTAGGACTCGCGTCCCCCTAGCCCATCCAGTGCTC 858
Query 113 TACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTAT 172
|||| || || | ||||||| |||||||| |||||| ||||||||||||||
Sbjct 859 TACCCCCAACGGTAATCCATCGACGCTCTACCTAAATAGATTTCGCGGAGAACCAGCTAT 918
Query 173 CACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTA 232
| |||||||||||||||||||||||| |||||| |||||| ||||||||
Sbjct 919 TTCCGAGTTTGATTGGCCTTTCACCCCTAGCCACAGCTCATCCAACACCTTTTCAACGGT 978
Query 233 AGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCAC 292
| |||||| |||||| ||| |||||| ||||| |||| |||||| ||||||||
Sbjct 979 GATTAGTTCGGCCCTCCAGTGGGTGTTACCCCACCTTCAGCCTGACCATGGCTAGATCAC 1038
Query 293 TTCGCTTCGGGTCTTGATCGTGC-CACTCATACGCCCTATTCGGACTCGCTTTCGCTACG 351
| |||||||| | ||| | | ||| | ||||||| ||| |||||||||||||| ||
Sbjct 1039 CCGGTTTCGGGTC-TAATCCTACGAACTGA-ACGCCCTGTTCAGACTCGCTTTCGCTGCG 1096
Query 352 GCTACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAA 411
|||| || ||| |||| || || | || | || |||| | | |||| | ||| |
Sbjct 1097 CCTACACCTATCGGCTTAAGCTTGC-TCGTAAGACTAAGTCGCTGACCCATTATACAAGA 1155
Query 412 GGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGG 471
|| |||| |||||| || |||| ||||| || | ||||||||| ||
Sbjct 1156 GGTACGCGGTCACC-----CCATAAAG------AGGCTCCCACTGTTTGTAGGCATTCGG 1204
Query 472 TTTCAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTT 530
|||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1205 TTTCAGGTTCTATTTCACTCCCCTTATCGGGGTGCTTTTCACCTTTCCCTCACGGTACTT 1264
Query 531 GTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
|| | ||||||||||| ||||||| |||||||| |||||||||| ||| |||| ||
Sbjct 1265 GTTCACTATCGGTCACTGAGGAGTACTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 1324
>seq198914
Length=2821
Score = 315 bits (348), Expect = 3e-83
Identities = 404/551 (73%), Gaps = 21/551 (4%)
Strand=Plus/Plus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTC 112
||||||||||||||| ||| || |||| | | | |||||||| |||| ||||||||
Sbjct 999 GGCATTCGGAGTTTGATTGGGTTTGGTAGGTCTTTCAACCCCCTAGCCCATTCAGTGCTC 1058
Query 113 TACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTAT 172
||||||| |||| | || ||| |||||||| |||||||||||||||||||||
Sbjct 1059 TACCTCCACCCGCTAACATGTGAGGCTATACCTAAATATATTTCGGGGAGAACCAGCTAT 1118
Query 173 CACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTA 232
||||| ||| || | ||||| | || ||||||| |||||| | ||||||||||
Sbjct 1119 CACGAGCCTTGTTTAGTCTTTCGCTCCGATCCACAACTCATCCGATAGGTTTTCAACCCT 1178
Query 233 AGTGGGTTCGGTCCTCCAC-GCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCA 291
| ||| ||| ||||||| | ||| || | |||||| |||| ||||||||||||
Sbjct 1179 AACCGGTGCGGGCCTCCACGGAGGTTTTCTCTCTGCTTCACCCTGGTCATGGATAGATCG 1238
Query 292 CTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACG 351
||||||||||||| || || ||| | |||||| ||| |||||||||||||||||
Sbjct 1239 ACTCGCTTCGGGTCTATCTCCAGCGACTGA-ACGCCCCGTTCAGACTCGCTTTCGCTACG 1297
Query 352 GCT--ACCCCACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAA 409
||| ||| | | ||| ||||||| || || || | ||||||| ||| |||| | |||
Sbjct 1298 GCTACACCTCTCTCGGCTTAACCTAGCCACTGAA-GATAACTCGCTGGCCCATTATGCAA 1356
Query 410 AAGGCACGCCGTCA-------CCTGGTACCTAAAAGGCACTTCA------GCTCCGACGG 456
|||| |||| |||| ||||| | | || | || | || | || |
Sbjct 1357 AAGGTACGCGGTCAGGCATTTCCTGGGAGC--AAGCTCCCTGGATATAGCCCTTCCACCG 1414
Query 457 ATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCA-GGGGTACTTTTCACCTT 515
|| | ||||| | ||||||| | |||||||||||||| | | ||||| |||||||||||
Sbjct 1415 ATCGCAGGCAGACAGTTTCAGATTCTATTTCACTCCCCTCAACGGGGTTCTTTTCACCTT 1474
Query 516 TCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTC 575
||||||||||||||||| | ||||||||| | |||||||| ||| |||||||
Sbjct 1475 TCCCTCACGGTACTTGTTCACTATCGGTCGACGGCACGTATTTAGCCTTGGAAGGTGGTC 1534
Query 576 CCGCCAGATTC 586
| ||||||||
Sbjct 1535 CTCCCAGATTC 1545
>seq163170
Length=29127
Score = 259 bits (286), Expect = 2e-66
Identities = 344/470 (73%), Gaps = 27/470 (6%)
Strand=Plus/Plus
Query 137 GCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCAC 196
||||| ||| || |||||||||||||||||||||| | | ||| || |||| ||||||
Sbjct 23408 GCTGCGCCTCAACGCATTTCGGGGAGAACCAGCTAGCTCTGGGTTCGAGTGGCATTTCAC 23467
Query 197 CCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGT 256
||||| ||||| |||||| || | | |||||| | ||| ||||||| ||||||| ||
Sbjct 23468 CCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGACCTCCACTTAGT 23527
Query 257 CTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGT-CTTGATC-GTG 314
| |||| |||||| |||| |||||||||||||| | ||||||| | | | | |||
Sbjct 23528 TTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAGGTTCGGGTCCATAAGCAGTG 23587
Query 315 CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGG----GTTAA 370
|| | ||||||| |||||||||||||||||||| || || ||||
Sbjct 23588 ACAAT----TGCCCTATGAAGACTCGCTTTCGCTACGGCT---CCGGTGGGTTCCCTTAA 23640
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | | |||| |||||||||||||| |||||||| |||| |
Sbjct 23641 CCAAGC--CACTGCCTATGAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA----GA 23694
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
|| ||| | |||| || | ||| || | ||||||| || |||||||||
Sbjct 23695 GCC--CCGGGCTC-----CTCCCACTGCTTGGGAGCTTACGGTTTCATGTTCTATTTCAC 23747
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
|||||| ||||| ||||||||| ||||||||||||||| | |||||||||||||| |
Sbjct 23748 TCCCCGATGGGGGTTCTTTTCACCCTTCCCTCACGGTACTACTTCGCTATCGGTCACCCA 23807
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||||||||||| ||| |||||||| | |||||||||| ||| ||
Sbjct 23808 GGAGTATTTAGCCTTGCAAGGTGGTCCTTGCTGATTCACACGGGATTCCA 23857
>seq208757
Length=368
Score = 194 bits (214), Expect = 6e-47
Identities = 190/242 (79%), Gaps = 5/242 (2%)
Strand=Plus/Plus
Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTT-GTGGGCCCCCTAGACCATCCAGTGCT 111
||||||||||||||||||| | |||||| | || ||| ||| || ||||||||||||
Sbjct 128 GGCATTCGGAGTTTGGTTGGGGTTAGTAAGCCTCGTCGGCTCCCGAGCCCATCCAGTGCT 187
Query 112 CTACCTCCGGGAAGAAACA---CGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAG 168
|||||||| | | | || | ||| || ||| |||| |||||||||||||||||
Sbjct 188 CTACCTCCCGCAC-ACTCATTTCCCGAGGCCCTACCAAAATAGATTTCGGGGAGAACCAG 246
Query 169 CTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAA 228
||||| | || ||||||||||||||||||||| ||||| |||||| | ||||||||
Sbjct 247 CTATCTCCGAGCTTGATTGGCCTTTCACCCCTACCCACAACTCATCCGAGCGGTTTTCAA 306
Query 229 CCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGA 288
|| | |||||||||||||||||| | |||| | |||||||||||| ||| | ||||
Sbjct 307 CCCACAACGGTTCGGTCCTCCACGCGCTGTTACGCACGCTTCAACCTGGACATAGGTAGA 366
Query 289 TC 290
||
Sbjct 367 TC 368
>seq237902
Length=373
Score = 181 bits (200), Expect = 4e-43
Identities = 168/212 (79%), Gaps = 6/212 (3%)
Strand=Plus/Plus
Query 388 AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAG 447
||||||| || |||| | |||||||||||| |||| | || || | | |
Sbjct 41 AACTCGCCGGATCATAATGCAAAAGGCACGCAGTCAGGCCAT-CCGAAGATGACC----- 94
Query 448 CTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTT 507
|||| || | |||| ||||| ||||||||||||||||||||||||| || |||||||||
Sbjct 95 CTCCTACCGCTTGTCAGCACACGGTTTCAGGTACTATTTCACTCCCCTCCCGGGGTACTT 154
Query 508 TTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAAC 567
|||||||||||||||||||||| |||| |||||||||| | |||||||||||| |||
Sbjct 155 TTCACCTTTCCCTCACGGTACTAGTCCACTATCGGTCATCGAGGAGTATTTAGCCTTGGA 214
Query 568 GGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||||||||| |||||||| | | | ||| ||
Sbjct 215 GGGTGGTCCCCCCAGATTCGCGCAACATTCCA 246
>seq212791
Length=233936
Score = 161 bits (178), Expect = 4e-37
Identities = 344/499 (69%), Gaps = 26/499 (5%)
Strand=Plus/Minus
Query 88 GGGCC-CCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTA 146
||||| |||||| |||| ||||||||||||| || | ||| ||||| || |
Sbjct 195687 GGGCCACCCTAGCCCATTGAGTGCTCTACCTCGGGCCATCGACATCATACGCTCTACTGA 195628
Query 147 AATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCAC 206
||| |||||| ||| |||||||||| | | ||| ||||||||||||||||| ||||
Sbjct 195627 AATAGATTTCGCGGAAAACCAGCTATATCCGATCTTGGTTGGCCTTTCACCCCTAGCCAC 195568
Query 207 AGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTA-CCCGC 265
| ||||||||| | ||| | || || ||||||||||||||||| | | ||| | |
Sbjct 195567 AAGTCATCCCCGTATTTTGCCACATACGTGGGTTCGGTCCTCCAAGGCCTGTTAGAGCTC 195508
Query 266 GCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACG 325
||||||||||| ||||| |||||| | | |||||||| || | | | | |
Sbjct 195507 TCTTCAACCTGCTCATGGCTAGATCGATCGGTTTCGGGTC-AAATAGGAAGAACTAGAAG 195449
Query 326 CCCTATTCGGACTCGCTTTCGCTA-CGGCTACCCCACACGGGTTAA-CCTCGCGACACAA 383
|||| || || | | | || |||| || | || |||| || | | ||
Sbjct 195448 ----ATTC-CAC---CTCTGGAAAGCGCCTACACCTAATGGCTTAAGCCGCTGTTCCCAT 195397
Query 384 CGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCA-CCTG-GTAC-CTAAAAGGC 440
| ||||| | | ||| | ||||||| ||||||| | || || | ||
Sbjct 195396 TTC---CTCGCTGACCCATCATGCAAAAGGTACGCCGTTAGAGTGAGTGCGCT-----TT 195345
Query 441 ACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGT--ACTATTTCACTCCCCGCCA 498
||| | || |||| |||||| ||| | | |||||| ||||| |||||||
Sbjct 195344 ACTACTCCTTCGACTGATTGTTCGCATCGGATCTCAGGTTCTCTATTGCACTCCCTAAAT 195285
Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558
|||| ||||||||||||||||||||||||| | |||||||||||| |||| || ||
Sbjct 195284 AGGGTTCTTTTCACCTTTCCCTCACGGTACTACTTCGCTATCGGTCATTGAGGAATACTT 195225
Query 559 AGGCTTAACGGGTGGTCCC 577
||||||| ||||||||||
Sbjct 195224 AGGCTTAGAGGGTGGTCCC 195206
>seq157969
Length=290
Score = 158 bits (174), Expect = 4e-36
Identities = 118/137 (86%), Gaps = 1/137 (1%)
Strand=Plus/Plus
Query 452 GACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCC-GCCAGGGGTACTTTTC 510
||| | ||||||||||| ||||||||||||||||||||||||| | | ||||| ||||||
Sbjct 1 GACCGCTTGTAGGCACACGGTTTCAGGTACTATTTCACTCCCCTGTCTGGGGTGCTTTTC 60
Query 511 ACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGG 570
||||||||||||||||||| || | ||||||||| | ||||||||||||| |||| | |
Sbjct 61 ACCTTTCCCTCACGGTACTGGTTCACTATCGGTCGCTAAGGAGTATTTAGCCTTACCAGA 120
Query 571 TGGTCCCGCCAGATTCA 587
|||| | | ||||||||
Sbjct 121 TGGTGCTGGCAGATTCA 137
>seq233390
Length=250
Score = 138 bits (152), Expect = 4e-30
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 21 CCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTA 80
||||| |||| | ||||| | | |||||| || |||||||||||||||| || ||||
Sbjct 22 CCCGCCGTCTGTCTGCCGCA-TATTACTTCCAGGTATTCGGAGTTTGGTTGGGTTTGGTA 80
Query 81 AGCTTGTGGGC-CCCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCT 139
| | | | ||||||| ||||||||||||||||| || ||| | | |||||||
Sbjct 81 ATACTATACGTACCCCTAGCCCATCCAGTGCTCTACCCCCTGGAGTATTCGTGCGACGCG 140
Query 140 GCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCC 199
|||||||| ||||| ||| ||||||||||| | | |||||| ||||||||||||
Sbjct 141 ATACCTAAATATCTTTCGCGGAAAACCAGCTATCTCCAGCCTTGATTAGCCTTTCACCCC 200
Query 200 TATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCC 249
|| ||||| |||||| |||||||| | ||||||| |||||
Sbjct 201 TAGCCACAACTCATCCGAGGCCTTTTCAACGGACACCGGTTCGGCCCTCC 250
>seq170992
Length=905
Score = 120 bits (132), Expect = 1e-24
Identities = 81/91 (89%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 497 CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTAT 556
||||||| ||||||||||||||||||||||||| || | ||||||||||||| |||||||
Sbjct 1 CAGGGGTTCTTTTCACCTTTCCCTCACGGTACTAGTTCACTATCGGTCACCAGGGAGTAT 60
Query 557 TTAGGCTTAACGGGTGGTCCCGCCAGATTCA 587
|||| ||| |||||||||| |||||||||
Sbjct 61 TTAGCCTTGGAGGGTGGTCCCCCCAGATTCA 91
>seq181327
Length=281
Score = 114 bits (126), Expect = 5e-23
Identities = 86/101 (85%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 499 GGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTT 558
||||| ||||||||||||||||||||||||| || | ||||||||| ||| | |||||||
Sbjct 4 GGGGTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCGCCAGGTAGTATTT 63
Query 559 AGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|| ||| |||||||||| |||||||||||| ||||||
Sbjct 64 AGCCTTGGAGGGTGGTCCCCCCAGATTCACACCGGATTTCA 104
>seq226853
Length=20166
Score = 75.2 bits (82), Expect = 4e-11
Identities = 71/91 (78%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 186 TGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTC 245
|||| ||||||||||| ||||| |||||| || | | |||||| | ||| ||||||| |
Sbjct 93 TGGCATTTCACCCCTAACCACAACTCATCCGCTGATTCTTCAACATCAGTCGGTTCGGAC 34
Query 246 CTCCACGCGGTCTTACCCGCGCTTCAACCTG 276
|||||| || | |||| |||||| ||||
Sbjct 33 CTCCACTTAGTTTCACCCAAGCTTCATCCTG 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1813265242112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |