Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Citrus_20x_20paradisi_20x_20Citrus_20trifoliata_20[genbank_20GCA_5F0
01929425.1_202017-01-03] 238,488 sequences; 265,533,993 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq130997 313 5e-83
seq118330 313 5e-83
>seq130997
Length=1587
Score = 313 bits (346), Expect = 5e-83
Identities = 261/313 (83%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCC-GCTTTGGCGG-GTCGCCGGCTTCTT 77
|| |||||||| | |||||||| |||| | || | | | | || ||| |||||||
Sbjct 605 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTCCGTGGCCAGCTTCTT 664
Query 78 AGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135
||||||||||| | ||| | ||| | |||||||||||||||||||||||||||||||||
Sbjct 665 AGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 723
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||||||||||||||||||||||||||||| | |||||||| || |||||
Sbjct 724 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTG 783
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
|||| ||| | |||||||||| | ||| | ||||| |||||||||| ||||||||||
Sbjct 784 GCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAATT 842
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||||
Sbjct 843 GTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTC 902
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 903 CCTGCCCTTTGTA 915
>seq118330
Length=3206
Score = 313 bits (346), Expect = 5e-83
Identities = 261/313 (83%), Gaps = 6/313 (2%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCC-GCTTTGGCGG-GTCGCCGGCTTCTT 77
|| |||||||| | |||||||| |||| | || | | | | || ||| |||||||
Sbjct 2685 GAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTATCCCTCCGTGGCCAGCTTCTT 2744
Query 78 AGAGGGACTATCG--GCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135
||||||||||| | ||| | ||| | |||||||||||||||||||||||||||||||||
Sbjct 2745 AGAGGGACTATGGCCGCTTAGGCCAA-GGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 2803
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||||||||||||||||||||||||||||| | |||||||| || |||||
Sbjct 2804 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTG 2863
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
|||| ||| | |||||||||| | ||| | ||||| |||||||||| ||||||||||
Sbjct 2864 GCCGACAGGCCCGGGTAATCTT-TGAAATTTCATCGTGATGGGGATAGATCATTGCAATT 2922
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
||| ||||||||||||||| ||||||||||||| ||||||||| |||||||| ||||||
Sbjct 2923 GTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTC 2982
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 2983 CCTGCCCTTTGTA 2995
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944941041664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |