Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq453 230 5e-58 seq145 93.3 9e-17 >seq453 Length=77385 Score = 230 bits (254), Expect = 5e-58 Identities = 253/329 (77%), Gaps = 21/329 (6%) Strand=Plus/Plus Query 10 CCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAA 69 ||| || |||||| | | |||||||||||| || |||||||||||||||||| || Sbjct 52987 CCGTAGGCCTTCTACCTC-CACGCGGCATTG-CTCCGTCAGGCTTTCGCCCATTGCGGAA 53044 Query 70 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGA 129 |||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||| Sbjct 53045 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 53104 Query 130 TCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGC 189 |||||||||| |||||| ||| |||| |||||||||| ||| ||| |||||||||||||| Sbjct 53105 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 53164 Query 190 TAATCCGAC-CTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTTTCTCCCGT 248 ||||| ||| | || | | || || ||| || ||| |||| | | | Sbjct 53165 TAATCAGACGCGAGCCCCTCCT-----CG---GGC-----GGATTCCTCCTTTTGCTCCT 53211 Query 249 AGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCA--GGCAGAT 306 | | || | ||||||||| |||||||| ||| | ||| || ||| ||||| | Sbjct 53212 CAG-CCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCC--CTCCCAAGGGCAGGT 53268 Query 307 TCCTAGGCATTACTCACCCGTCCGCCGCT 335 || || || ||||||||||||||||| || Sbjct 53269 TCTTACGCGTTACTCACCCGTCCGCCACT 53297 >seq145 Length=10181 Score = 93.3 bits (102), Expect = 9e-17 Identities = 114/152 (75%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 31 CGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCC 90 |||||| ||| || || ||||||||||| ||| |||||| |||||||||||| Sbjct 9391 CGCGGCCTTG-CTCCGTCCGGCTTTCGCCCCTTGCGGCCCCTTCCCC-CTGCTGCCTCCC 9334 Query 91 GTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTAC 150 || || |||||| ||||||||| || || ||||| ||| || ||||||| | || | | | Sbjct 9333 GTCGGCGTCTGGGCCGTGTCTCCGTCCCCGTGTGGCTGCTCCTCCTCTC-GGCCCGCTCC 9275 Query 151 GGATCGTCGCCTTGGTGAGCCATTACCTCACC 182 | || |||||||||| || || |||| || Sbjct 9274 TGCTCCTCGCCTTGGTCCGCTCTTGCCTCCCC 9243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071992442400