Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Conringia_20planisiliqua_20[genbank_20GCA_5F900108845.1_202016-12- 31] 705 sequences; 184,155,600 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq453 269 6e-70 seq145 107 5e-21 >seq453 Length=77385 Score = 269 bits (298), Expect = 6e-70 Identities = 303/404 (75%), Gaps = 30/404 (7%) Strand=Plus/Plus Query 11 ACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAA 70 ||||| ||||||||| | | |||||||||| ||| | |||||||| ||||||||| | || Sbjct 52985 ACCCGTAGGCCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAA 53044 Query 71 TATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGG 130 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 53045 AATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCTGA 53104 Query 131 TCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC 190 |||||||||| ||||||||| |||| |||||| ||| || ||| || | ||||||||| Sbjct 53105 TCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTAAGCTATTGCCTCACCAACTAGC 53164 Query 191 TAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTGGTCTTGC 250 ||||| | | | | ||| || | || ||| ||| |||| || | Sbjct 53165 TAATCAGACGCGAGCCCCTCC--------TCGGGCGGA--TTCCTCCT-TTTGCTCCTCA 53213 Query 251 GACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTTCC 310 | | || | ||||||||| |||||||||| ||| | ||||||| ||||| ||| Sbjct 53214 GCC--TACGGGGTATTAGCAGCCGTTTCCAGCTGTTGTTCCCCTCCCAAGGGCAGGTTCT 53271 Query 311 CAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 | | |||||||||||||||||||| ||| || || |||| ||| Sbjct 53272 TACGCGTTACTCACCCGTCCGCCACT------GGAAACACCA-----CTTC------CCG 53314 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | |||||||||||||||| || ||||||||||||||| ||||| Sbjct 53315 TCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTTCATCCTGAG 53358 >seq145 Length=10181 Score = 107 bits (118), Expect = 5e-21 Identities = 119/156 (76%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 12 CCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAAT 71 |||| |||||||| | | | |||||| | ||| | || ||||| ||||| ||| | Sbjct 9412 CCCGTCGGCCTTCTCCCTCCCCGCGGCCTTGCTCCGTCCGGCTTTCGCCCCTTGCGGCCC 9353 Query 72 ATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGT 131 |||||| |||||||||||||| || |||||| ||||||||| || || ||||||||| | Sbjct 9352 CTTCCCC-CTGCTGCCTCCCGTCGGCGTCTGGGCCGTGTCTCCGTCCCCGTGTGGCTGCT 9294 Query 132 CATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGT 167 | ||||||| | || ||| | || |||||| ||| Sbjct 9293 CCTCCTCTC-GGCCCGCTCCTGCTCCTCGCCTTGGT 9259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222391382080